Gene DvMF_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0558 
Symbol 
ID7172445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp658770 
End bp659045 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content58% 
IMG OID643539058 
Producthistone family protein DNA-binding protein 
Protein accessionYP_002434983 
Protein GI218885662 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.000235916 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAAGA GCGAACTCAT CAAGACGCTG TCCGAAGAGA CGAACATCCC CATCGAGGAA 
GCCGCCATGG TCGTGAACAC CTTCGTGGAC AACATGAAGG AAGCGCTGGC CGATGGCGAC
CGCGTGGAAA TCCGCGGTTT CGGCAGCTTC AAGGTCAAGG ACTACGGCGG CTACTCCGGT
CGCAACCCCA AGACCGGCGA CATGGTCGTC GTTCAGCCCA AACGCCTGCC CTTCTTCCGC
GCCGGGAAGG AACTGAAAGA ATTCCTCAAC GATTAG
 
Protein sequence
MNKSELIKTL SEETNIPIEE AAMVVNTFVD NMKEALADGD RVEIRGFGSF KVKDYGGYSG 
RNPKTGDMVV VQPKRLPFFR AGKELKEFLN D