Gene Daci_4725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4725 
Symbol 
ID5750317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5180110 
End bp5180451 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content67% 
IMG OID641299830 
Productintegration host factor, beta subunit 
Protein accessionYP_001565739 
Protein GI160900157 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.929388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAT CCGATCTCGT CGAAGAACTC GCCGCCCGCT TTGGCCAACT GAGCCAGCGC 
GATGCCGAGC AGGCCGTCAA GACGATTCTT GACGCCGTCA GCGATGCCCT GGTGCGAGGC
CATCGCATCG AAATCCGCGG CTTTGGCAGT TTCTCGGTCA ACCATCGCCC GCCCCGCATG
GGCCGCAATC CCCGCAGTGG CGAGGCCGTC CACATTCCGT CCAAGCGCGT GCCGCACTTC
AAGCCCGGCA AGGCCCTGCG CGAAGCCGTG GACCTGCGCC CCGGTGTGGC CATCGATACA
GACAACACAG GCTCCGGCAC AGGCTCCGGC CCTGCCGCCT GA
 
Protein sequence
MTRSDLVEEL AARFGQLSQR DAEQAVKTIL DAVSDALVRG HRIEIRGFGS FSVNHRPPRM 
GRNPRSGEAV HIPSKRVPHF KPGKALREAV DLRPGVAIDT DNTGSGTGSG PAA