Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4725 |
Symbol | |
ID | 5750317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5180110 |
End bp | 5180451 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641299830 |
Product | integration host factor, beta subunit |
Protein accession | YP_001565739 |
Protein GI | 160900157 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.929388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAT CCGATCTCGT CGAAGAACTC GCCGCCCGCT TTGGCCAACT GAGCCAGCGC GATGCCGAGC AGGCCGTCAA GACGATTCTT GACGCCGTCA GCGATGCCCT GGTGCGAGGC CATCGCATCG AAATCCGCGG CTTTGGCAGT TTCTCGGTCA ACCATCGCCC GCCCCGCATG GGCCGCAATC CCCGCAGTGG CGAGGCCGTC CACATTCCGT CCAAGCGCGT GCCGCACTTC AAGCCCGGCA AGGCCCTGCG CGAAGCCGTG GACCTGCGCC CCGGTGTGGC CATCGATACA GACAACACAG GCTCCGGCAC AGGCTCCGGC CCTGCCGCCT GA
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Protein sequence | MTRSDLVEEL AARFGQLSQR DAEQAVKTIL DAVSDALVRG HRIEIRGFGS FSVNHRPPRM GRNPRSGEAV HIPSKRVPHF KPGKALREAV DLRPGVAIDT DNTGSGTGSG PAA
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