| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1281 |
|---|
| Symbol | ihfB |
|---|
| ID | 3568740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1392710 |
|---|
| End bp | 1392994 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637679744 |
|---|
| Product | integration host factor subunit beta |
|---|
| Protein accession | YP_284503 |
|---|
| Protein GI | 71906916 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 0.218086 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAT CCGAGCTCAT CGCCCAGCTG GCGGAGCGTT TTCCGCAGTT GGTGGCGAAG
GATGCTGATT TTGCGGTCAA GATGATTCTC GATGCGATGT CCGAAGCACT TGTGCGAGGA
GATCGTATCG AGATCCGTGG ATTCGGCAGC TTTGCGCTCA ACTACCGTCC CCCGCGTGTT
GGACGCAATC CCAAATCGGG GGAAAAGGTC AGCGTGCCGG CGAAGTGGGT TCCCCACTTC
AAGGCCGGAA AAGAATTGCG AGAAAGGGTC GATCAGGCGA TCTAA
|
|---|
| Protein sequence | MTKSELIAQL AERFPQLVAK DADFAVKMIL DAMSEALVRG DRIEIRGFGS FALNYRPPRV
GRNPKSGEKV SVPAKWVPHF KAGKELRERV DQAI
|
|---|
| |