| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1855 |
|---|
| Symbol | ihfB |
|---|
| ID | 5109985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 2045735 |
|---|
| End bp | 2046022 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640503087 |
|---|
| Product | integration host factor subunit beta |
|---|
| Protein accession | YP_001187351 |
|---|
| Protein GI | 146306886 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.756472 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGT CGGAGTTGAT CGAAAGAATT GTCACCCACC AAGGCCAGCT GTCCTCCAAG
GATGTTGAGC TGGCCATCAA GACCATGCTG GAACAAATGT CCCAGGCCTT GGCCACGGGA
GACCGGATCG AGATTCGCGG CTTTGGCAGC TTCTCGCTGC ATTACCGCGC ACCGAGGGTT
GGTCGTAATC CGAAAACCGG CCAGTCGGTC CGGCTGGATG GCAAGTTCGT GCCGCATTTC
AAGCCGGGGA AGGAACTGCG CGACCGAGTC AATGAAGATG AATCGTAA
|
|---|
| Protein sequence | MTKSELIERI VTHQGQLSSK DVELAIKTML EQMSQALATG DRIEIRGFGS FSLHYRAPRV
GRNPKTGQSV RLDGKFVPHF KPGKELRDRV NEDES
|
|---|
| |