Gene Swit_2409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2409 
Symbol 
ID5196951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2678792 
End bp2679070 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content57% 
IMG OID640581955 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001262906 
Protein GI148555324 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0906126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAGAT CAGAACTGGT ACAATTGCTG TCGCAGGACA ATCCTGACCT TTCTCCCAAA 
GAAGTGGAGA AGATCGTGTC GACCTTGTTC GATGCGATCA CAAAACGACT GGCTGAAGGC
GGGCGCGTGG AGCTTCGCGG TTTTGGCGCT TTTTCTACGC GGGCGCGCGA TGCCCGGATC
GGACGAAATC CGAGGACTGG CGATACCGTG CCGGTTTCCG CCAAGCGCGT GCCTTATTTC
AAGCCCGGAA AGGAAATGCG GGTCCGCCTG AACGTCTGA
 
Protein sequence
MIRSELVQLL SQDNPDLSPK EVEKIVSTLF DAITKRLAEG GRVELRGFGA FSTRARDARI 
GRNPRTGDTV PVSAKRVPYF KPGKEMRVRL NV