More than 300 homologs were found in PanDaTox collection
for query gene Oter_2654 on replicon NC_010571
Organism: Opitutus terrae PB90-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010571  Oter_2654  histone family protein DNA-binding protein  100 
 
 
102 aa  199  9e-51  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_0281  histone family protein DNA-binding protein  49.5 
 
 
101 aa  94.7  4e-19  Akkermansia muciniphila ATCC BAA-835  Bacteria  unclonable  0.00000000512973  normal 
 
 
-
 
NC_008751  Dvul_2207  histone family protein DNA-binding protein  42.39 
 
 
91 aa  68.9  0.00000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  0.976216  normal  0.483194 
 
 
-
 
NC_013171  Apre_0964  histone family protein DNA-binding protein  38.04 
 
 
92 aa  68.6  0.00000000003  Anaerococcus prevotii DSM 20548  Bacteria  decreased coverage  0.00000000994236  n/a   
 
 
-
 
NC_014148  Plim_1271  histone family protein DNA-binding protein  43.62 
 
 
171 aa  67.8  0.00000000005  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1886  integration host factor, alpha subunit  34.74 
 
 
99 aa  66.6  0.0000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.067674 
 
 
-
 
NC_010814  Glov_1918  histone family protein DNA-binding protein  36.96 
 
 
92 aa  65.9  0.0000000002  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0000225021  n/a   
 
 
-
 
NC_011145  AnaeK_1909  integration host factor subunit alpha  35.56 
 
 
113 aa  65.9  0.0000000002  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1969  integration host factor subunit alpha  35.56 
 
 
113 aa  65.5  0.0000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.0019696  n/a   
 
 
-
 
NC_008530  LGAS_0894  nucleoid DNA-binding protein  43.82 
 
 
91 aa  65.5  0.0000000002  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  8.08972e-16  hitchhiker  0.000000000000265027 
 
 
-
 
NC_011891  A2cp1_1994  integration host factor subunit alpha  35.56 
 
 
113 aa  65.9  0.0000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.110028  n/a   
 
 
-
 
NC_007519  Dde_2752  histone-like DNA-binding protein  42.39 
 
 
91 aa  64.7  0.0000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2799  histone family protein DNA-binding protein  41.3 
 
 
91 aa  64.7  0.0000000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007969  Pcryo_1653  histone-like DNA-binding protein  36.67 
 
 
90 aa  64.3  0.0000000006  Psychrobacter cryohalolentis K5  Bacteria  unclonable  0.00000047794  unclonable  0.0000440637 
 
 
 
NC_013440  Hoch_3742  integration host factor, alpha subunit  38.46 
 
 
100 aa  63.9  0.0000000007  Haliangium ochraceum DSM 14365  Bacteria  normal  0.266099  normal  0.554438 
 
 
-
 
NC_013522  Taci_0790  histone family protein DNA-binding protein  38.71 
 
 
93 aa  63.9  0.0000000008  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  hitchhiker  0.000040725  n/a   
 
 
-
 
NC_007204  Psyc_1474  putative DNA-binding protein HU-beta  35.56 
 
 
90 aa  63.2  0.000000001  Psychrobacter arcticus 273-4  Bacteria  hitchhiker  0.0000000000000997119  hitchhiker  0.0000985943 
 
 
-
 
NC_010338  Caul_3032  integration host factor subunit alpha  29.47 
 
 
100 aa  62.8  0.000000001  Caulobacter sp. K31  Bacteria  normal  0.814183  normal  0.51505 
 
 
-
 
NC_010622  Bphy_0747  integration host factor subunit beta  36.84 
 
 
107 aa  62.8  0.000000001  Burkholderia phymatum STM815  Bacteria  normal  0.189639  normal 
 
 
-
 
NC_008009  Acid345_1185  histone-like DNA-binding protein  40.66 
 
 
107 aa  63.2  0.000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0083  DNA-binding protein HU (DNA-binding protein II)  41.11 
 
 
90 aa  63.2  0.000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1258  DNA-binding protein HU  35.87 
 
 
92 aa  62  0.000000002  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_008783  BARBAKC583_0550  DNA-binding protein HU-beta  39.13 
 
 
92 aa  62.4  0.000000002  Bartonella bacilliformis KC583  Bacteria  normal  0.169626  n/a   
 
 
-
 
NC_011311  VSAL_p840_66  DNA-binding protein HU-alpha  37.78 
 
 
91 aa  62.4  0.000000002  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0113448  n/a   
 
 
-
 
NC_009513  Lreu_0765  nucleoid protein Hbs  41.57 
 
 
91 aa  62.4  0.000000002  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000296782  n/a   
 
 
-
 
NC_010002  Daci_4725  integration host factor, beta subunit  36.26 
 
 
113 aa  62.4  0.000000002  Delftia acidovorans SPH-1  Bacteria  normal  0.929388  normal 
 
 
-
 
NC_007951  Bxe_A0983  integration host factor subunit beta  36.84 
 
 
107 aa  62.4  0.000000002  Burkholderia xenovorans LB400  Bacteria  normal  0.131421  normal 
 
 
-
 
NC_012918  GM21_2224  histone family protein DNA-binding protein  36.67 
 
 
92 aa  62  0.000000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000923552 
 
 
-
 
NC_010577  XfasM23_2014  integration host factor subunit alpha  35.56 
 
 
99 aa  62  0.000000003  Xylella fastidiosa M23  Bacteria  normal  0.0886978  n/a   
 
 
-
 
NC_011662  Tmz1t_3034  integration host factor subunit beta  35.48 
 
 
95 aa  62  0.000000003  Thauera sp. MZ1T  Bacteria  normal  0.0949718  n/a   
 
 
-
 
NC_007347  Reut_A2568  integration host factor subunit beta  35.79 
 
 
137 aa  61.6  0.000000003  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3000  integration host factor subunit beta  35.79 
 
 
107 aa  61.6  0.000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.125834  hitchhiker  0.00514155 
 
 
-
 
NC_007520  Tcr_1180  histone-like DNA-binding protein  35.56 
 
 
90 aa  62  0.000000003  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  2.95654e-16  n/a   
 
 
-
 
NC_011146  Gbem_1996  histone family protein DNA-binding protein  36.67 
 
 
92 aa  62  0.000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2511  histone family protein DNA-binding protein  37.5 
 
 
92 aa  61.6  0.000000003  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000006954  n/a   
 
 
-
 
NC_010513  Xfasm12_2093  integration host factor subunit alpha  35.56 
 
 
99 aa  62  0.000000003  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3125  histone family protein DNA-binding protein  35.11 
 
 
112 aa  62  0.000000003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0598577  decreased coverage  0.00823154 
 
 
-
 
NC_009483  Gura_2622  histone family protein DNA-binding protein  35.56 
 
 
92 aa  61.2  0.000000004  Geobacter uraniireducens Rf4  Bacteria  normal  0.349381  n/a   
 
 
-
 
NC_009943  Dole_1031  histone family protein DNA-binding protein  36.67 
 
 
94 aa  61.6  0.000000004  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1007  integration host factor subunit beta  37.63 
 
 
107 aa  61.2  0.000000004  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.864933  normal 
 
 
-
 
NC_011883  Ddes_0087  histone family protein DNA-binding protein  39.13 
 
 
91 aa  61.6  0.000000004  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_1118  HU family DNA-binding protein  40.66 
 
 
91 aa  61.2  0.000000004  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00000128568  normal 
 
 
-
 
NC_012034  Athe_0648  histone family protein DNA-binding protein  35.87 
 
 
91 aa  61.2  0.000000004  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000417185  n/a   
 
 
-
 
NC_007973  Rmet_0723  integration host factor subunit beta  35.79 
 
 
135 aa  61.6  0.000000004  Cupriavidus metallidurans CH34  Bacteria  normal  0.0626289  normal 
 
 
-
 
NC_008060  Bcen_0569  integration host factor subunit beta  37.63 
 
 
107 aa  61.2  0.000000004  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2444  integration host factor, beta subunit  41.76 
 
 
103 aa  61.2  0.000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.45625  normal 
 
 
-
 
NC_008542  Bcen2424_1048  integration host factor subunit beta  37.63 
 
 
107 aa  61.2  0.000000004  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4161  integration host factor subunit beta  37.63 
 
 
107 aa  61.2  0.000000005  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3356  histone-like DNA-binding protein  42.11 
 
 
95 aa  60.8  0.000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.860208  n/a   
 
 
-
 
NC_009636  Smed_0830  integration host factor subunit alpha  34.02 
 
 
112 aa  61.2  0.000000005  Sinorhizobium medicae WSM419  Bacteria  normal  0.120813  normal  0.0891496 
 
 
-
 
NC_008752  Aave_3286  histone family protein DNA-binding protein  35.48 
 
 
109 aa  61.2  0.000000005  Acidovorax citrulli AAC00-1  Bacteria  hitchhiker  0.00577956  normal 
 
 
-
 
NC_011769  DvMF_0500  histone family protein DNA-binding protein  38.46 
 
 
90 aa  61.2  0.000000005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.000759527 
 
 
-
 
NC_011757  Mchl_0121  integration host factor, beta subunit  38.14 
 
 
102 aa  60.8  0.000000006  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.879931  normal 
 
 
-
 
NC_010172  Mext_0179  integration host factor, beta subunit  38.14 
 
 
102 aa  60.8  0.000000006  Methylobacterium extorquens PA1  Bacteria  normal  0.958396  normal 
 
 
-
 
NC_007498  Pcar_1424  integration host factor, alpha subunit  32.98 
 
 
93 aa  60.8  0.000000006  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000000184784  n/a   
 
 
-
 
NC_010622  Bphy_3067  histone family protein DNA-binding protein  35.87 
 
 
92 aa  60.8  0.000000006  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0353619 
 
 
-
 
NC_009076  BURPS1106A_0004  DNA-binding protein HU-alpha  34.78 
 
 
92 aa  60.5  0.000000007  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR1105  DNA-binding protein HU  37.78 
 
 
91 aa  60.8  0.000000007  Brucella suis 1330  Bacteria  normal  0.965912  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2571  integration host factor subunit beta  36.56 
 
 
107 aa  60.5  0.000000007  Burkholderia mallei SAVP1  Bacteria  normal  0.444385  n/a   
 
 
-
 
NC_008836  BMA10229_A0946  integration host factor subunit beta  36.56 
 
 
107 aa  60.5  0.000000007  Burkholderia mallei NCTC 10229  Bacteria  normal  0.666677  n/a   
 
 
-
 
NC_009076  BURPS1106A_2944  integration host factor subunit beta  36.56 
 
 
107 aa  60.5  0.000000007  Burkholderia pseudomallei 1106a  Bacteria  normal  0.846703  n/a   
 
 
-
 
NC_006348  BMA0427  integration host factor subunit beta  36.56 
 
 
107 aa  60.5  0.000000007  Burkholderia mallei ATCC 23344  Bacteria  normal  0.496954  n/a   
 
 
-
 
NC_006348  BMA2913  DNA-binding protein HU, form B  34.78 
 
 
92 aa  60.5  0.000000007  Burkholderia mallei ATCC 23344  Bacteria  normal  0.5361  n/a   
 
 
-
 
NC_007434  BURPS1710b_2992  integration host factor subunit beta  36.56 
 
 
107 aa  60.5  0.000000007  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0202  integration host factor subunit beta  36.56 
 
 
107 aa  60.5  0.000000007  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2203  histone family protein DNA-binding protein  37.78 
 
 
91 aa  60.8  0.000000007  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0471577  n/a   
 
 
-
 
NC_009074  BURPS668_0004  DNA-binding protein HU-alpha  34.78 
 
 
92 aa  60.5  0.000000007  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1639  integration host factor subunit beta  36.56 
 
 
107 aa  60.5  0.000000007  Burkholderia thailandensis E264  Bacteria  normal  0.79916  n/a   
 
 
-
 
NC_009074  BURPS668_2881  integration host factor subunit beta  36.56 
 
 
107 aa  60.5  0.000000007  Burkholderia pseudomallei 668  Bacteria  normal  0.0601006  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2184  histone family protein DNA-binding protein  39.56 
 
 
90 aa  60.5  0.000000007  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.170143  n/a   
 
 
-
 
NC_009080  BMA10247_2972  DNA-binding protein HU-alpha  34.78 
 
 
92 aa  60.5  0.000000007  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3397  DNA-binding protein HU, form B  34.78 
 
 
92 aa  60.5  0.000000007  Burkholderia mallei SAVP1  Bacteria  normal  0.218557  n/a   
 
 
-
 
NC_009524  PsycPRwf_1626  histone family protein DNA-binding protein  36.67 
 
 
90 aa  60.5  0.000000007  Psychrobacter sp. PRwf-1  Bacteria  unclonable  0.00000000000133039  hitchhiker  0.00000000638901 
 
 
-
 
NC_008836  BMA10229_A1629  DNA-binding protein HU, form B  34.78 
 
 
92 aa  60.5  0.000000007  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2470  integration host factor, beta subunit  35.48 
 
 
103 aa  60.5  0.000000008  Acidovorax sp. JS42  Bacteria  normal  0.391555  normal  0.36333 
 
 
-
 
NC_011992  Dtpsy_1390  integration host factor, beta subunit  35.48 
 
 
103 aa  60.5  0.000000008  Acidovorax ebreus TPSY  Bacteria  normal  0.0244556  n/a   
 
 
-
 
NC_010511  M446_2501  integration host factor, beta subunit  41.76 
 
 
106 aa  60.5  0.000000008  Methylobacterium sp. 4-46  Bacteria  normal  0.201217  normal 
 
 
-
 
NC_002620  TC0538  integration host factor beta subunit, putative  36.96 
 
 
100 aa  60.1  0.000000009  Chlamydia muridarum Nigg  Bacteria  unclonable  0.00000418171  n/a   
 
 
-
 
NC_003295  RSc0910  integration host factor subunit beta  34.74 
 
 
138 aa  60.5  0.000000009  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  38.46 
 
 
90 aa  60.1  0.000000009  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010725  Mpop_0204  integration host factor, beta subunit  39.78 
 
 
102 aa  60.1  0.000000009  Methylobacterium populi BJ001  Bacteria  normal  0.137338  normal 
 
 
-
 
NC_009505  BOV_1064  DNA-binding protein HU  37.78 
 
 
91 aa  60.1  0.000000009  Brucella ovis ATCC 25840  Bacteria  normal  0.203306  n/a   
 
 
-
 
NC_008528  OEOE_1010  nucleoid protein Hbs  40.45 
 
 
91 aa  60.5  0.000000009  Oenococcus oeni PSU-1  Bacteria  normal  0.301873  n/a   
 
 
-
 
NC_010508  Bcenmc03_0084  histone family protein DNA-binding protein  34.78 
 
 
92 aa  59.7  0.00000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0780  integration host factor subunit beta  34.74 
 
 
142 aa  60.1  0.00000001  Ralstonia pickettii 12J  Bacteria  normal  normal  0.034129 
 
 
-
 
NC_003909  BCE_2407  DNA-binding protein HU  38.46 
 
 
90 aa  60.1  0.00000001  Bacillus cereus ATCC 10987  Bacteria  normal  0.020348  n/a   
 
 
-
 
NC_010581  Bind_0376  histone family protein DNA-binding protein  37.78 
 
 
171 aa  60.1  0.00000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.611734  normal 
 
 
-
 
NC_005957  BT9727_2152  DNA-binding protein HU  38.46 
 
 
90 aa  60.1  0.00000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0274093  n/a   
 
 
-
 
NC_006274  BCZK2136  DNA-binding protein HU  38.46 
 
 
90 aa  60.1  0.00000001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0065  histone family protein DNA-binding protein  34.78 
 
 
92 aa  59.7  0.00000001  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A3247  histone-like DNA-binding protein  34.78 
 
 
92 aa  59.7  0.00000001  Burkholderia sp. 383  Bacteria  normal  normal  0.704477 
 
 
-
 
NC_010084  Bmul_0066  histone family protein DNA-binding protein  34.78 
 
 
92 aa  59.7  0.00000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_2377  DNA-binding protein HU  38.46 
 
 
90 aa  60.1  0.00000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0004  DNA-binding protein HU-alpha  34.74 
 
 
126 aa  60.1  0.00000001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2256  integration host factor subunit beta  36.56 
 
 
107 aa  59.7  0.00000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A2342  DNA-binding protein HU  38.46 
 
 
90 aa  60.1  0.00000001  Bacillus cereus B4264  Bacteria  normal  0.868034  n/a   
 
 
-
 
NC_008060  Bcen_0005  histone-like DNA-binding protein  34.78 
 
 
92 aa  59.7  0.00000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.129264  n/a   
 
 
-
 
NC_008390  Bamb_0055  histone family protein DNA-binding protein  34.78 
 
 
92 aa  59.7  0.00000001  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0651  integration host factor, alpha subunit  37.36 
 
 
112 aa  60.1  0.00000001  Methylocella silvestris BL2  Bacteria  n/a    hitchhiker  0.00749057 
 
 
-
 
NC_008542  Bcen2424_0065  histone family protein DNA-binding protein  34.78 
 
 
92 aa  59.7  0.00000001  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
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