Gene Bpro_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1788 
Symbol 
ID4015573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1848433 
End bp1848747 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content61% 
IMG OID637941460 
Productintegration host factor, beta subunit 
Protein accessionYP_548622 
Protein GI91787670 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000860483 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCGAA GCGACCTTGT AGAAGAACTG GCAGCCCGAT TCAGCCAGCT GACGCACCGC 
GATGCCGAAT ATGCCGTCAA GACGATTCTT GATGCCATGA GCGACGCGCT GGTACGCGGC
CACCGGATTG AAATCAGGGG TTTTGGCAGT TTCTCCATCA ACCGTCGCCC TCCCCGCATG
GGTCGCAACC CCCGCTCCGG CGAAAGTGTG GCCATCCCCG AAAAGCGGGT GCCCCACTTC
AAGCCGGGAA AGGCGTTGCG GGAGGCGGTC GATGCACGGA CCGAGGAATT GCTGACGGTC
ACGGACTCCA GATGA
 
Protein sequence
MTRSDLVEEL AARFSQLTHR DAEYAVKTIL DAMSDALVRG HRIEIRGFGS FSINRRPPRM 
GRNPRSGESV AIPEKRVPHF KPGKALREAV DARTEELLTV TDSR