Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1788 |
Symbol | |
ID | 4015573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 1848433 |
End bp | 1848747 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637941460 |
Product | integration host factor, beta subunit |
Protein accession | YP_548622 |
Protein GI | 91787670 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000860483 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCCGAA GCGACCTTGT AGAAGAACTG GCAGCCCGAT TCAGCCAGCT GACGCACCGC GATGCCGAAT ATGCCGTCAA GACGATTCTT GATGCCATGA GCGACGCGCT GGTACGCGGC CACCGGATTG AAATCAGGGG TTTTGGCAGT TTCTCCATCA ACCGTCGCCC TCCCCGCATG GGTCGCAACC CCCGCTCCGG CGAAAGTGTG GCCATCCCCG AAAAGCGGGT GCCCCACTTC AAGCCGGGAA AGGCGTTGCG GGAGGCGGTC GATGCACGGA CCGAGGAATT GCTGACGGTC ACGGACTCCA GATGA
|
Protein sequence | MTRSDLVEEL AARFSQLTHR DAEYAVKTIL DAMSDALVRG HRIEIRGFGS FSINRRPPRM GRNPRSGESV AIPEKRVPHF KPGKALREAV DARTEELLTV TDSR
|
| |