More than 300 homologs were found in PanDaTox collection
for query gene Sdel_2081 on replicon NC_013512
Organism: Sulfurospirillum deleyianum DSM 6946



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013512  Sdel_2081  response regulator receiver  100 
 
 
224 aa  443  1e-123  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0827  response regulator receiver domain-containing protein  54.59 
 
 
221 aa  240  1e-62  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.914575  n/a   
 
 
-
 
NC_013512  Sdel_0106  response regulator receiver  42.06 
 
 
218 aa  185  4e-46  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1440  response regulator receiver protein  28.84 
 
 
219 aa  111  9e-24  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_1378  response regulator receiver domain-containing protein  28.84 
 
 
219 aa  110  1.0000000000000001e-23  Geobacter metallireducens GS-15  Bacteria  normal  0.321431  normal  0.0110306 
 
 
-
 
NC_007575  Suden_0247  two component transcriptional regulator  36.97 
 
 
226 aa  82  0.000000000000006  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_0722  response regulator receiver domain-containing protein  34.87 
 
 
227 aa  75.9  0.0000000000005  Campylobacter concisus 13826  Bacteria  normal  0.0554017  n/a   
 
 
-
 
NC_010814  Glov_1899  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  33.93 
 
 
616 aa  75.1  0.0000000000009  Geobacter lovleyi SZ  Bacteria  normal  0.764058  n/a   
 
 
-
 
NC_003912  CJE1664  DNA-binding response regulator  36.36 
 
 
226 aa  72.8  0.000000000004  Campylobacter jejuni RM1221  Bacteria  normal  0.690265  n/a   
 
 
-
 
NC_008599  CFF8240_0377  DNA-binding response regulator  31.47 
 
 
226 aa  72.8  0.000000000004  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.306284  n/a   
 
 
-
 
NC_013512  Sdel_0363  response regulator receiver  34.11 
 
 
228 aa  71.6  0.000000000009  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0280  Fis family transcriptional regulator  30.13 
 
 
450 aa  71.6  0.00000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.928901  n/a   
 
 
-
 
NC_008787  CJJ81176_1483  DNA-binding response regulator  35.54 
 
 
226 aa  71.6  0.00000000001  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0448  response regulator receiver  25.33 
 
 
224 aa  71.2  0.00000000001  Sulfurospirillum deleyianum DSM 6946  Bacteria  unclonable  0.00000000838603  n/a   
 
 
-
 
NC_013173  Dbac_0628  two component, sigma54 specific, transcriptional regulator, Fis family  31.9 
 
 
446 aa  70.1  0.00000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2120  multi-sensor signal transduction histidine kinase  35.25 
 
 
547 aa  70.1  0.00000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0893  diguanylate cyclase  31.15 
 
 
566 aa  69.3  0.00000000005  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2195  multi-sensor signal transduction histidine kinase  27.15 
 
 
502 aa  68.9  0.00000000006  Geobacter sp. M21  Bacteria  n/a    normal  0.067402 
 
 
-
 
NC_008576  Mmc1_1399  response regulator receiver modulated diguanylate cyclase  33.05 
 
 
476 aa  68.9  0.00000000006  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2096  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  32.61 
 
 
953 aa  68.6  0.00000000007  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000903564 
 
 
-
 
NC_007575  Suden_1991  two component transcriptional regulator  36.07 
 
 
229 aa  68.6  0.00000000007  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.656084  n/a   
 
 
-
 
NC_012918  GM21_2098  multi-sensor signal transduction histidine kinase  30.92 
 
 
547 aa  68.6  0.00000000008  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000413163 
 
 
-
 
NC_013512  Sdel_0685  response regulator receiver  33.33 
 
 
236 aa  68.2  0.00000000009  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1837  DNA-binding response regulator  33.88 
 
 
226 aa  67.4  0.0000000002  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.591446  n/a   
 
 
-
 
NC_010814  Glov_3210  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  33.93 
 
 
425 aa  67.4  0.0000000002  Geobacter lovleyi SZ  Bacteria  normal  0.141244  n/a   
 
 
-
 
NC_008576  Mmc1_2943  response regulator receiver modulated diguanylate cyclase  34.95 
 
 
438 aa  67  0.0000000002  Magnetococcus sp. MC-1  Bacteria  normal  0.641955  normal 
 
 
-
 
NC_011146  Gbem_2024  multi-sensor signal transduction histidine kinase  27.15 
 
 
517 aa  66.2  0.0000000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1880  two component transcriptional regulator  38.05 
 
 
223 aa  66.2  0.0000000004  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_1362  DNA-binding response regulator  27.56 
 
 
225 aa  65.5  0.0000000007  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1920  response regulator receiver  33.61 
 
 
226 aa  65.1  0.0000000008  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2122  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  30.43 
 
 
953 aa  63.9  0.000000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.0111685  n/a   
 
 
-
 
NC_009715  CCV52592_0851  two component transcriptional regulator  29.03 
 
 
230 aa  63.5  0.000000002  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4975  PAS/PAC sensor hybrid histidine kinase  30 
 
 
660 aa  63.5  0.000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0986  multi-sensor signal transduction histidine kinase  23.81 
 
 
487 aa  63.9  0.000000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1214  DNA-binding transcriptional activator KdpE  33.93 
 
 
226 aa  63.9  0.000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  hitchhiker  0.00514307  n/a   
 
 
-
 
NC_009715  CCV52592_1547  cytochrome c biogenesis protein  29.92 
 
 
220 aa  63.9  0.000000002  Campylobacter curvus 525.92  Bacteria  normal  0.0873939  n/a   
 
 
-
 
NC_008228  Patl_1534  response regulator receiver protein  35.54 
 
 
439 aa  63.9  0.000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1219  response regulator receiver sensor signal transduction histidine kinase  27.34 
 
 
396 aa  63.2  0.000000003  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.0000364001 
 
 
-
 
NC_013162  Coch_1562  histidine kinase  28.93 
 
 
1296 aa  63.2  0.000000003  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.655639  n/a   
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  26.36 
 
 
374 aa  63.2  0.000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_009675  Anae109_1105  two component, sigma54 specific, Fis family transcriptional regulator  31.93 
 
 
475 aa  63.2  0.000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.926771  normal  0.835973 
 
 
-
 
NC_013216  Dtox_0970  two component, sigma54 specific, transcriptional regulator, Fis family  35.19 
 
 
459 aa  62.8  0.000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000694494  normal  0.524712 
 
 
-
 
NC_007947  Mfla_2450  nitrogen metabolism transcriptional regulator, NtrC, Fis family  40.51 
 
 
462 aa  62.8  0.000000005  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000104491  normal  0.63173 
 
 
-
 
NC_013223  Dret_0887  response regulator receiver modulated metal dependent phosphohydrolase  28.87 
 
 
496 aa  62  0.000000007  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.384329  normal 
 
 
-
 
NC_012912  Dd1591_2931  DNA-binding transcriptional activator KdpE  32.8 
 
 
229 aa  62  0.000000008  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1331  multi-sensor signal transduction histidine kinase  32.06 
 
 
576 aa  62  0.000000008  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_013526  Tter_2094  two component transcriptional regulator, winged helix family  32.79 
 
 
231 aa  61.6  0.000000008  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2990  two component transcriptional regulator  31.67 
 
 
230 aa  62  0.000000008  Nitrobacter hamburgensis X14  Bacteria  normal  0.839569  n/a   
 
 
-
 
NC_011146  Gbem_3634  response regulator receiver sensor signal transduction histidine kinase  31.39 
 
 
379 aa  62  0.000000008  Geobacter bemidjiensis Bem  Bacteria  normal  0.0261897  n/a   
 
 
-
 
NC_007517  Gmet_0202  response regulator receiver sensor signal transduction histidine kinase  31.9 
 
 
374 aa  61.6  0.000000009  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_012918  GM21_3739  response regulator receiver sensor signal transduction histidine kinase  30.66 
 
 
379 aa  61.6  0.000000009  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009074  BURPS668_1246  KDP operon transcriptional regulatory protein KdpE  32.03 
 
 
232 aa  60.8  0.00000001  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_1869  NAD(P)H-flavin oxidoreductase  31.15 
 
 
229 aa  61.2  0.00000001  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1254  KDP operon transcriptional regulatory protein KdpE  32.03 
 
 
234 aa  60.8  0.00000001  Burkholderia pseudomallei 1106a  Bacteria  decreased coverage  0.00667548  n/a   
 
 
-
 
NC_006348  BMA1872  DNA-binding response regulator KdpE  32.03 
 
 
234 aa  60.8  0.00000001  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0800306  n/a   
 
 
-
 
NC_011663  Sbal223_3070  two component transcriptional regulator, LuxR family  23.56 
 
 
216 aa  60.8  0.00000001  Shewanella baltica OS223  Bacteria  decreased coverage  0.000689776  unclonable  0.00000000000283062 
 
 
-
 
NC_008785  BMASAVP1_A1088  DNA-binding response regulator KdpE  32.03 
 
 
234 aa  60.8  0.00000001  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0207  response regulator receiver protein  26.95 
 
 
252 aa  61.6  0.00000001  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_2139  response regulator receiver  27.67 
 
 
236 aa  60.8  0.00000001  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0213  response regulator receiver  26.95 
 
 
252 aa  61.6  0.00000001  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1397  DNA-binding response regulator KdpE  32.03 
 
 
232 aa  60.8  0.00000001  Burkholderia pseudomallei 1710b  Bacteria  normal  0.089264  n/a   
 
 
-
 
NC_011898  Ccel_1982  two component transcriptional regulator, AraC family  30.09 
 
 
544 aa  60.8  0.00000001  Clostridium cellulolyticum H10  Bacteria  normal  0.184696  n/a   
 
 
-
 
NC_007575  Suden_0009  two component transcriptional regulator  30.71 
 
 
224 aa  61.2  0.00000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3805  response regulator receiver domain-containing protein  30.77 
 
 
439 aa  61.2  0.00000001  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_3153  response regulator receiver sensor signal transduction histidine kinase  27.69 
 
 
366 aa  61.2  0.00000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0371  DNA-binding response regulator KdpE  32.03 
 
 
234 aa  60.8  0.00000001  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0779  DNA-binding response regulator KdpE  32.03 
 
 
234 aa  60.8  0.00000001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.97246  n/a   
 
 
-
 
NC_011126  HY04AAS1_1332  two component, sigma54 specific, transcriptional regulator, Fis family  34.59 
 
 
439 aa  60.5  0.00000002  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0208  response regulator receiver domain-containing protein  30.08 
 
 
564 aa  60.8  0.00000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0771  two component AraC family transcriptional regulator  27.61 
 
 
355 aa  60.5  0.00000002  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000000862622  n/a   
 
 
-
 
NC_013223  Dret_2242  two component, sigma54 specific, transcriptional regulator, Fis family  32.11 
 
 
464 aa  60.1  0.00000003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.719582 
 
 
-
 
NC_007651  BTH_I1025  DNA-binding response regulator KdpE  31.25 
 
 
234 aa  60.1  0.00000003  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1378  response regulator receiver modulated metal dependent phosphohydrolase  25.93 
 
 
348 aa  59.7  0.00000003  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00581699  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0590  two component, sigma54 specific, transcriptional regulator, Fis family  30.91 
 
 
440 aa  59.7  0.00000003  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06763  transcriptional regulatory protein CpxR  24.2 
 
 
221 aa  59.3  0.00000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_1722  two component AraC family transcriptional regulator  34.17 
 
 
508 aa  59.3  0.00000004  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1901  two component, sigma54 specific, Fis family transcriptional regulator  32.65 
 
 
473 aa  59.3  0.00000004  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0172472 
 
 
-
 
NC_009483  Gura_0224  response regulator receiver sensor signal transduction histidine kinase  26.72 
 
 
379 aa  59.7  0.00000004  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0853  two component transcriptional regulator, AraC family  34.83 
 
 
509 aa  59.3  0.00000005  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1285  two component LuxR family transcriptional regulator  22.99 
 
 
216 aa  58.9  0.00000006  Shewanella baltica OS185  Bacteria  decreased coverage  0.000337392  n/a   
 
 
-
 
NC_013512  Sdel_0705  response regulator receiver  31.54 
 
 
231 aa  58.9  0.00000006  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00025775  n/a   
 
 
-
 
NC_002950  PG0928  response regulator  33.63 
 
 
518 aa  58.5  0.00000007  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.581359 
 
 
-
 
NC_009052  Sbal_1241  two component LuxR family transcriptional regulator  22.99 
 
 
216 aa  58.5  0.00000007  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000399601  n/a   
 
 
-
 
NC_009997  Sbal195_1319  two component LuxR family transcriptional regulator  22.99 
 
 
216 aa  58.5  0.00000007  Shewanella baltica OS195  Bacteria  normal  0.0542522  decreased coverage  0.000972679 
 
 
-
 
NC_008609  Ppro_0115  response regulator receiver modulated diguanylate cyclase  33.59 
 
 
304 aa  58.9  0.00000007  Pelobacter propionicus DSM 2379  Bacteria  normal  0.113218  n/a   
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  30.95 
 
 
122 aa  58.5  0.00000008  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1126  DNA-binding transcriptional activator KdpE  33.33 
 
 
226 aa  58.5  0.00000008  Dickeya dadantii Ech703  Bacteria  normal  0.296902  n/a   
 
 
-
 
NC_008060  Bcen_1378  two component, sigma54 specific, Fis family transcriptional regulator  29.75 
 
 
455 aa  58.5  0.00000008  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.713038  n/a   
 
 
-
 
NC_008544  Bcen2424_6451  two component, sigma54 specific, Fis family transcriptional regulator  29.75 
 
 
455 aa  58.5  0.00000008  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3033  two component transcriptional regulator, winged helix family  20.47 
 
 
235 aa  58.2  0.00000009  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.219709  n/a   
 
 
-
 
NC_010622  Bphy_0992  PAS/PAC sensor hybrid histidine kinase  25.81 
 
 
663 aa  57.8  0.0000001  Burkholderia phymatum STM815  Bacteria  normal  0.374279  normal 
 
 
-
 
NC_011146  Gbem_0681  response regulator receiver protein  29.37 
 
 
639 aa  58.2  0.0000001  Geobacter bemidjiensis Bem  Bacteria  normal  0.657626  n/a   
 
 
-
 
NC_013037  Dfer_1607  histidine kinase  27.37 
 
 
1366 aa  57.8  0.0000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.89561 
 
 
-
 
NC_013411  GYMC61_2718  two component transcriptional regulator, AraC family  30.09 
 
 
259 aa  57.8  0.0000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008009  Acid345_2782  two component, sigma54 specific, Fis family transcriptional regulator  28.68 
 
 
463 aa  57.8  0.0000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.795323  normal 
 
 
-
 
NC_013730  Slin_4321  histidine kinase  29.07 
 
 
1355 aa  57.8  0.0000001  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.295286 
 
 
-
 
NC_008687  Pden_4008  two component, sigma54 specific, Fis family transcriptional regulator  28.33 
 
 
456 aa  58.2  0.0000001  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.704595 
 
 
-
 
NC_011205  SeD_A0810  DNA-binding transcriptional activator KdpE  34.78 
 
 
225 aa  57  0.0000002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0569  response regulator receiver protein  29.55 
 
 
129 aa  57.4  0.0000002  Geobacter lovleyi SZ  Bacteria  normal  0.303984  n/a   
 
 
-
 
NC_010087  Bmul_5447  two component, sigma54 specific, Fis family transcriptional regulator  28.93 
 
 
455 aa  57.4  0.0000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00491011 
 
 
-
 
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