Gene BMA1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1872 
SymbolkdpE 
ID3089913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp1961045 
End bp1961749 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content70% 
IMG OID637562531 
ProductDNA-binding response regulator KdpE 
Protein accessionYP_103471 
Protein GI53725411 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0800306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATGA GTGAACCGAC CGTTACCGTC GTCCTGATCG AAGACGAAAA ACAGATTCGC 
CGTTTCGTGC GCAGCGCGCT CGAGGAAGAG GGGATCGCCG TGTTCGACGC CGAAACGGGC
CGCCAGGGCC TGATCGAGGC CGCGACCCGC AAGCCCGATC TCGCGATCGT CGATCTCGGC
CTGCCGGACG GCGACGGCCT CGACGTGATC CGCGAGCTGC GCGGCTGGTC CGAGATGCCG
GTGATCGTGC TGTCGGCGCG CACGCACGAG GAGGAGAAGG TGGCCGCGCT CGACGCCGGC
GCGGATGATT ACCTGACGAA GCCGTTCGGC GTATCCGAGC TGCTCGCGCG GATCCGCGCG
CATCTGCGGC GGCGCAATCA GGCAGGCGCG GCCGAATCGC CGGTCGTCAG GTTCGGCGAC
GTGAGCGTCG ACCTCGCGCT GCGGCGGGTA TGGCGGGGCG GCGAGGTCGT GCATCTGACG
CCGCTCGAAT ACCGGCTGCT CGCGACGCTC GTGCGGCACG CGGGCCGCGT GCTCACGCAC
CGCCAGCTGT TGCGCGACGT CTGGGGGCCG ACGCACGTCG AGAGCCACCA CTACCTGCGG
ATCTACATGG CGCATTTGCG GCAGAAGCTC GAGGCCGACC CCGCGCAGCC GCAGCACATC
GTGACCGAGA CGGGCGTCGG TTACCGGCTC GTCGGCGCGG GCTGA
 
Protein sequence
MPMSEPTVTV VLIEDEKQIR RFVRSALEEE GIAVFDAETG RQGLIEAATR KPDLAIVDLG 
LPDGDGLDVI RELRGWSEMP VIVLSARTHE EEKVAALDAG ADDYLTKPFG VSELLARIRA
HLRRRNQAGA AESPVVRFGD VSVDLALRRV WRGGEVVHLT PLEYRLLATL VRHAGRVLTH
RQLLRDVWGP THVESHHYLR IYMAHLRQKL EADPAQPQHI VTETGVGYRL VGAG