| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4008 |
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| Symbol | |
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| ID | 4582559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 1150919 |
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| End bp | 1152289 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639771317 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_917770 |
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| Protein GI | 119386715 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.704595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACCG AAGCCGACTC GGTGCCCGCA CCCCAGGGCG CCCCCGATGA CGCACTTGCG
CAAGCCACCA TCCTCGTGAT CGAGGACGAG CCGGGGATGC GGAACTTTCT GGAACGGATC
CTGGCCTCGA AATGCCGCGG CATCCGGCTG GCCGCGAATA CGGCGGAAGC CAGCGCCCTG
ATCGCCGAGA CGGCTTTCGA TCTGGTCATC CTCGACAATC TGATGGAGGG TCAGCGCGGC
GTGGACTGGC TGCGCGAACA GCGCCCGCAG GGCTTTTTCC CGCCCGCGAT CCTGATGACC
GCCTATGCCG ATCTGGAAAC CGCCATCCAG GCGCTGCAGG CCGGCGCCTC GGATTTCCTG
CTGAAGCCCT TTCGCGCCAA TCAGTTGCTG AACACCATCA ACCGCTGCCT GGAGGGCGAA
AGGCTGCGGC GCGAGAACCT GATCCTGCAA CAGGAGTTGC GCAACAACGT CGATCTGGGC
CGGCTGCGGA ACGAGTTGAT CGGCACGTCG CCCGCCATCG AGCGCGTGAG GCAGGTGATC
GCCCGCGTGG CGCCGGCGCC GTCCTCGGTG CTGATCACCG GCGCCTCGGG CTCGGGCAAG
GAGGTGGCGG CGCGGATGAT CCACACGCTG TCCGAGCGCG CGCAGATGCC GTTTGTCGCG
GTGAACTGCG CCGCCATCCC GCACGACATG CTGGAGGACG AACTTTTCGG CCATATCAAG
GGCGCGTTTC CCGGCGCCGA CAGGAATCGC GAGGGGCTGT TCACCTCTGC GCGCGGCGGG
ACGCTGTTTC TGGACGAGAT CGCCGGATTG CCCGTCGCCC TGCAAGCCAA GCTCTTGCGC
GCGATCGACG ATCGCCGCAT CCGGCCCTTG GGATCGGAAC GCGAAACGAC GGTCGACCTG
CGCCTGATCT TTGCCGCAAA TACCGATCTG GACCGGGCCG TGGCCGAGGG CCGGCTGCGC
GCGGACCTGC TTTATCGCAT CAACGTGCTG CATATCCACA TGCCGGCGCT GAAAGAGCGC
GGCGCCGACA TGTTCGACCT GGCGGCGATG TTCATGGACA GCCTGTCCCG GAACCTGGCC
ATGCCCAAGA TCCCGATCAC CCCCGAGGTG CGCGCAACCA TGGCGACCTA TGACTGGCCG
GGCAATGTGC GCGAGTTGCG CAACGCCATC GAGCGCGCGT TGATTCTGGG CCGCTTCACC
CCGCTGACGG CCACCGTGGG CAACAATGAC GGCCACACCC TTGCCGAGAT CGAACGCCGC
GCGATCCTTG GCGCCGTGGC GGCCTTCGAC GGCGACCGCG AGGCGGCGGC CGCCCGGCTG
GGCATCTCGC GCAAGACCAT CGACCGCAGG CTGGCGGACT GGAATGCCTG A
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| Protein sequence | MRTEADSVPA PQGAPDDALA QATILVIEDE PGMRNFLERI LASKCRGIRL AANTAEASAL
IAETAFDLVI LDNLMEGQRG VDWLREQRPQ GFFPPAILMT AYADLETAIQ ALQAGASDFL
LKPFRANQLL NTINRCLEGE RLRRENLILQ QELRNNVDLG RLRNELIGTS PAIERVRQVI
ARVAPAPSSV LITGASGSGK EVAARMIHTL SERAQMPFVA VNCAAIPHDM LEDELFGHIK
GAFPGADRNR EGLFTSARGG TLFLDEIAGL PVALQAKLLR AIDDRRIRPL GSERETTVDL
RLIFAANTDL DRAVAEGRLR ADLLYRINVL HIHMPALKER GADMFDLAAM FMDSLSRNLA
MPKIPITPEV RATMATYDWP GNVRELRNAI ERALILGRFT PLTATVGNND GHTLAEIERR
AILGAVAAFD GDREAAAARL GISRKTIDRR LADWNA
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