Gene PC1_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1214 
Symbol 
ID8132149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1417001 
End bp1417681 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content57% 
IMG OID644864502 
ProductDNA-binding transcriptional activator KdpE 
Protein accessionYP_003016798 
Protein GI253687608 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00514307 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGGCCA CTATTCTGAT CGTTGAAGAT GAAAAAGAGA TCCGTCGTTT CGTGCGTCAG 
GCGCTGGAAG GCGAAGGCTG TCGCGTGTTT GACGCAGAAA CAATGCAGCG CGGCTTGCTG
GAAGCGGCCA CGCGCAAACC CGATCTGATT ATTCTCGATT TAGGCCTGCC GGACGGCGAC
GGTATCGACT ACATCCGCGA TTTACGTCAG TGGAGCAGCC TGCCCGTGAT TGTGCTTTCC
GCCCGTACCG ACGAGCAGGA TAAAATAGAC GCGCTGGATG CGGGTGCCGA TGATTATCTG
ACCAAACCGT TCGGCATCGG CGAGTTGCTG GCGCGATTGC GCGTCGCGCT GCGTCGCCAC
AGCCATACTC AGCAGGAAAC GCCGCTGGTG AGTTTCGGTA CGATCACCGT AGATTTACTT
AATCGGCAGG TGAACCGCGA CGGTCAGGAA CTGCACCTGA CGCCCATCGA ATTTCGCCTT
CTGGCAACCT TGCTCGCCAG CCCCGGCAAA GTGCTGACGC AGCGCCAGCT TCTAACACAG
GTCTGGGGGC CGAACGCCGT CGAGCACAGT CACTATCTGC GTATTTATAT GGGGCACCTG
CGCCAGAAGC TGGAAAGCGA TCCGGCAAGA CCGCGCCATC TCTTGACGGA AACCGCTATC
GGTTATCGAT TTATGCCGTA A
 
Protein sequence
MQATILIVED EKEIRRFVRQ ALEGEGCRVF DAETMQRGLL EAATRKPDLI ILDLGLPDGD 
GIDYIRDLRQ WSSLPVIVLS ARTDEQDKID ALDAGADDYL TKPFGIGELL ARLRVALRRH
SHTQQETPLV SFGTITVDLL NRQVNRDGQE LHLTPIEFRL LATLLASPGK VLTQRQLLTQ
VWGPNAVEHS HYLRIYMGHL RQKLESDPAR PRHLLTETAI GYRFMP