| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_2931 |
|---|
| Symbol | |
|---|
| ID | 8118342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 3339214 |
|---|
| End bp | 3339903 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644853302 |
|---|
| Product | DNA-binding transcriptional activator KdpE |
|---|
| Protein accession | YP_003005232 |
|---|
| Protein GI | 251790511 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGACCCTGT TACAGACCAA CATTCTGATC GTAGAAGATG AAAAAGAGAT CCGGCGTTTT
GTCCGTAACG CGCTGGAGGG CGAAGGCTGC CGCGTATTTG AAGCGGAAAC GCTGCAACGA
GGATTGATAG AAGCGGCGAC CCGCAAACCG GATCTGATTA TTCTTGATTT AGGTCTGCCT
GACGGCGATG GCATTGATTA TATCCGCGAT CTGCGCCAGT GGAGCACGAT TCCGGTTATC
GTGTTGTCCG CCCGTACCGA CGAACAGGAT AAGATCGACG CGCTGGATGC CGGTGCTGAA
GATTATCTCA CCAAGCCGTT CGGCATTGGC GAATTGCTGG CGCGCTCACG GGTGGCTCTA
CGCCGCGTGA GCGCATCGCA GCAGGAAACC CCGCTGATTA CCTTTTCAAA CGTCACCGTG
GATTTGATTA ATCGCCAGGT GCTACGCAAC CAGCAGGAGT TACATCTGAC GCCGATCGAA
TTCCGGCTGC TGTCCACCCT ACTCGCCAAC CCCGGAAAGG TGCTGACGCA GCGTCAACTG
CTCAATCAGG TTTGGGGCCC CAACGCGGTG GAGCACAGCC ACTATCTGCG TATTTATATG
GGGCATTTGC GCCAGAAACT GGAAGGCGAC CCGGCCCGCC CGCGCCACTT TTTGACTGAA
ACCGCCATCG GCTACCGCTT TATGCCCTAG
|
|---|
| Protein sequence | MTLLQTNILI VEDEKEIRRF VRNALEGEGC RVFEAETLQR GLIEAATRKP DLIILDLGLP
DGDGIDYIRD LRQWSTIPVI VLSARTDEQD KIDALDAGAE DYLTKPFGIG ELLARSRVAL
RRVSASQQET PLITFSNVTV DLINRQVLRN QQELHLTPIE FRLLSTLLAN PGKVLTQRQL
LNQVWGPNAV EHSHYLRIYM GHLRQKLEGD PARPRHFLTE TAIGYRFMP
|
|---|
| |