| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0681 |
|---|
| Symbol | |
|---|
| ID | 6783514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 804484 |
|---|
| End bp | 806403 |
|---|
| Gene Length | 1920 bp |
|---|
| Protein Length | 639 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642766653 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_002137504 |
|---|
| Protein GI | 197117077 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.657626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAACACC GCATCCTTCT GGTCGAGGAC AACGACCGCC TGGCGGGGAT GCTGACCAGC
TTCCTCGCGT CGCTCGGGCA CGAGGTGCTA GCTTTGGCCG ACGCCGAGAC GGCGCTAGCC
CTCCTCGGGA AGGAAAAAAT CGACCTGCTG GTCCTGGACC TGAAACTCGC CGGGATGAAC
GGGGTGGAAC TGCTGCAGCG GGTGCGCAGG AACCCGGAGC TGAAAGAGCT CCCGGCAATC
ATCATGACCG GCGTTTTCCG CGGCGAGGGA TACGCGCGGG CAGCCGCGAA GCTTGGGGTA
AAGGCGTATC TGGAGAAGCC GTTTGGCAAG GACGCCTTTC TTGAGGCAGT CGGCGCCGCC
CTCGCCCCGC CGCCGGGACC AAGGGAGTTA TCAGCCATGC TGCTCGACCT CTACCATAAC
GGCAAAAGCG GCGTACTTCA GTTGGGAGGC GGGACGCGCG TCGTTTTTCT CGCCGGGGAA
CCCGCCTCTT TCTCCTCGCC CGGGTTCGTC CCGTTCCTGT TGGCGGAGGG GCGCCTGTTG
CGCGGCGACC TGGAGAAGTA CCCGCTCAGC CGGCCAGGCA AGATGCCGCT TTGCGAGGCG
GGGCTTTTGA ACTACGACGA ACTACAGGAG CAGTCGCGCC TGTTCCTCTC CAAGGTCCTG
GTCGAGGCGG TGCTGCAGAA TCAGCCCCCG CAGTTTCTGC CGGACGTAGG CGCCATCGAG
CCCCCGCTCA CGCCCCTTTC GTTGCCGCGC CTGCTGTACC AGGCGGCGAA ACAGGGGGCC
GACCGTTTCG GGGCCGACAG CTTCCTGAAC CGTACCGGAG CGCTCTTCCC CTTGAGAACG
GAGAGGTACT TCCGCCTAGC CAACCTGCTG GGGCTGGGCC CCGAGGAGAT AGGAGTACTG
GAGCAGTTGG GGCAGGGTAA AAGCGTCCGG GAGATCTTCG CCTCAGCCCC CCCCGCGCGG
CAGGCGTGGT TCCTCGATTT CCTGGTGCGG ATGGGCATGG TGAACCTCGC CCTGGAACCG
GCCGAGGACC GGGATGCGGG TTTCCCCCAG AAGATGCTCT TCAACCGCCC GATCGAAGAG
GTGGTCGAGG TGGAGGTCCA GGGGATGAGC TTCGAAGACC TGGTGGACGA GGTCTCGGAC
TCCATCGACC TGGCGGTGGG CGAGACCGGC ATGGCCGCGC CGCTTTCGGC AAGCGAGATC
GACTTCGAGC AGGAGGTCCA GCGCGACTAC GCCGCCATCC AGAACAAGAA CTACTACGAG
ATCTTCGGGC TCTCCCAGGC TAATTTCAGC TTCGCGAGCC TCAAGGAATC CTATTTCTCC
AAGACGCGCC AGTACTCCCC GGAAAAGTTC ATGCAGCTTT CCGGCGACAC CCTCTCCCGC
GCGCAGGACG TCCTATCCCA CTACGCCAAC GCCTACAACA CCCTCTCCAG CGTCATCGCC
AAGGAGCGCT ACGACGAGAT GCTGAACGCC AACGTGATCG GCCTCGGAGG GCGCCAGGAA
GACGCACTCC AGGCGCGCAT ACAGTTCCAG TCCGGCAAGG TCTTCCTGGA GATGGAGGAC
TACAAAAACG CCGAGCGCGC CCTGCAGGAT GCCTACACCC TCGACGCGGA GGACTCGCAG
ACCAGCGCCT ATCTGGCCTG GTCCATCTAC AAGAACCCCG CCAACCACGG GTCTCAGGTC
GCGCTGGAAA AGTGCCGCAT GCTCCTCTCC AAGAGCCTGC AGATGGGGCG CAGCGCCGAG
GCTTTCGCCT TCCGGGGGTG CATGCTGCTG GACGAGGGAA GAGACGGGCT CGCCGAGGGT
GAATTCCAGA AGGCGCTCAG GCTGAACCCG CAAGAGCGGC ATGCCCTGGG GGGGATGCGG
CTGATCCGGG AAAGGCACGA AGCCGAGAAG AAGGGACTCT TCAAGAGGAT CTTCGGTTAG
|
|---|
| Protein sequence | MKHRILLVED NDRLAGMLTS FLASLGHEVL ALADAETALA LLGKEKIDLL VLDLKLAGMN
GVELLQRVRR NPELKELPAI IMTGVFRGEG YARAAAKLGV KAYLEKPFGK DAFLEAVGAA
LAPPPGPREL SAMLLDLYHN GKSGVLQLGG GTRVVFLAGE PASFSSPGFV PFLLAEGRLL
RGDLEKYPLS RPGKMPLCEA GLLNYDELQE QSRLFLSKVL VEAVLQNQPP QFLPDVGAIE
PPLTPLSLPR LLYQAAKQGA DRFGADSFLN RTGALFPLRT ERYFRLANLL GLGPEEIGVL
EQLGQGKSVR EIFASAPPAR QAWFLDFLVR MGMVNLALEP AEDRDAGFPQ KMLFNRPIEE
VVEVEVQGMS FEDLVDEVSD SIDLAVGETG MAAPLSASEI DFEQEVQRDY AAIQNKNYYE
IFGLSQANFS FASLKESYFS KTRQYSPEKF MQLSGDTLSR AQDVLSHYAN AYNTLSSVIA
KERYDEMLNA NVIGLGGRQE DALQARIQFQ SGKVFLEMED YKNAERALQD AYTLDAEDSQ
TSAYLAWSIY KNPANHGSQV ALEKCRMLLS KSLQMGRSAE AFAFRGCMLL DEGRDGLAEG
EFQKALRLNP QERHALGGMR LIRERHEAEK KGLFKRIFG
|
|---|
| |