Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0590 |
Symbol | |
ID | 6331517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 606903 |
End bp | 608225 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642656877 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_001930782 |
Protein GI | 188996531 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAGA TTTTATTGAT TGATGATGAA GAAAGTATCT TAAAAGTTAT CAAAACGGTT TTATCAGAAG CAGGATTTGA AGTATTGACT GCAAAGTCTA AAAAAGAAAG CTTAAGCTTA ATAGAAAAAG AAAAGTTTGA CTTAATAATC TCAGACTTTT TATTAGAAGA TGGAACAGGA TTAGAGATTT TAGAAAGTTT TAGAAAAAAG GATATACTTA CACCTTTTTT AATCATTACA GCTTACGGGT CTATAAATGG AGCTGTAGAA GCTATCAAAA AAGGAGCTAA CCACTACATA CCCAAGCCAA TAGATATAGA TAATTTAATC AAAATAATTG ATTTTTATAT CAAAAAACAA GAAAATTTTG ATGTGGAAGA AGAGTTTGAA GGCATTATTG GAAAAAGTCA AAAGATGAAA GATTTATTCA AAGAAATAGA TGTTGTAAGT AAAAGCGAAT CTTCTATTTT GATTGAAGGA GAAAGCGGAA CAGGAAAAGA GCTTGTTGCA AAAGCCATTC ATAGAAGGTC AAAAAGAGCA AACCAACCAT TTATTCCTAT AAACTGTTCT GCTATACCCA ACGAGCTTTT TGAAAATGAG CTTTTTGGTC ATGAAAAAGG TTCCTTTACC GGAGCATCAA ACAGAGAAAT CGGAAAAATA GAGCTGGCTG GAGAAGGTAC GTTATTTTTA GACGAAATAG GGGAGATGCC ACTATTTATG CAGGCAAAAC TTTTAAGAGT TCTTCAAGAA AGAGAATTTT TTAGAGTTGG GGGAAAAGAA TTAATAAAAA TGAGATGTAG AGTAATCTCA GCAACCAACA GAAACCTTGA AGAAATGGTT GAAAACAAAG AATTTAGAGA AGATCTATTT TATAGAATAA ACGTAATTCA TTTAAAAATT CCACCTCTTA GAGAAAGAAA AGAAGATATT CCTCTCCTTG TCAAGAAATT TATCGATAAG TTTAGCAAGA TTAACAACAA AAACGTATAT GATATTGATA ATGATGCTTT AGAAATATTG ATGAATTACG ATTGGCCTGG AAACGTTAGA CAGCTTGAGA ATATCATTGA ACGGGCAGTT GTGTTATGCC AAGGTGAAAT AATCACAGCT AATCATCTTC CTGACAGGAT AAAGTCTAAC TCCCAAAAAA TATCAGAAAA TATAAGGTCA GAAAATAATA GTTTAAATCT TTATGATATT GAAAAAAATA TTATTTTAAA AGTTTTACAA GAAGAGAATT TTAATCAAAC AAGAGCAGCT CAAAAACTTG GAATTTCAAG AAAACAGCTG AGAACAAAGA TGAAAAACTT CGGTCTTCTC TGA
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Protein sequence | MFKILLIDDE ESILKVIKTV LSEAGFEVLT AKSKKESLSL IEKEKFDLII SDFLLEDGTG LEILESFRKK DILTPFLIIT AYGSINGAVE AIKKGANHYI PKPIDIDNLI KIIDFYIKKQ ENFDVEEEFE GIIGKSQKMK DLFKEIDVVS KSESSILIEG ESGTGKELVA KAIHRRSKRA NQPFIPINCS AIPNELFENE LFGHEKGSFT GASNREIGKI ELAGEGTLFL DEIGEMPLFM QAKLLRVLQE REFFRVGGKE LIKMRCRVIS ATNRNLEEMV ENKEFREDLF YRINVIHLKI PPLRERKEDI PLLVKKFIDK FSKINNKNVY DIDNDALEIL MNYDWPGNVR QLENIIERAV VLCQGEIITA NHLPDRIKSN SQKISENIRS ENNSLNLYDI EKNIILKVLQ EENFNQTRAA QKLGISRKQL RTKMKNFGLL
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