Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3805 |
Symbol | |
ID | 3966879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4805169 |
End bp | 4806488 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637922902 |
Product | response regulator receiver domain-containing protein |
Protein accession | YP_529272 |
Protein GI | 90023445 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGC AAGCGATGGC ACCTAATGAC TGCAGTAGTG TAACACTACT ATTTGTAGAT GATGAATTGC CAATATTGAA AGCGTTTAAA CGTTTAGTGC GTGGCAAAAA CTGGACAGTG TATTGTGCAG AGTCTGCGCA GCAGGGTATA CAAATACTTA GCCAAAATAA TGTCGATATT GTGGTTTCAG ATATGCGTAT GCCAAACATG AATGGCGCGC AGTTTTTATC TTATGTGCGA GATAACCACC CACAGGCACA GCGTATTCTT ATTACCGGCT ATAGCGATTT ACAGTCGCTT CAATCGGCCA TCAATGAGGC AAAAATATCT AATTATATAT CTAAGCCCTG GGAGGATGAG GCGTTACTGG ATGTGCTACA AAAAACAGTG GATATTCAGG AGGGTGAAAA AGAACGTCGT CGTTTAGAGC TAGTAAAAAA GTCTCAAAAT AAAAAGCTTG GGCGGTTGGC GTTAAGTTTA AATAGCCAAG TGAACGAAAA GTCGATGGAG GTGAATCAAG CATTAACCCT ACTGGAAATG GAGCGCAACC ATGCACAAAT GCGCGTGCAT GAACTAACTC ACGCGGTGCT TAAATTATTA GGGTTAAGTG GTAAGGGGCG GTCTTACGGT GCCTTTATAG CCGAAAGCGC AACAGCGGTA GGTCGGGCCA TAGGTTTATC GGCGCTTGAG CTAGAAAATT TATATATCGC AGCTGCATTA CATAATATTG GCTACTTGGT GTTAGGCGAG AGGGAGATGA TAGAGGATGC GAACGAACAG GAAAATGAGC ATTCCGAGCA ATATAAGGCT CAAGTAGCAA TTAGTGAGGA AATCCTCAAT GGGATGCCTG CTTTGGCGCC GGTTGCTTCA ATTATTGCTA CTCATAAAGA GCGTTTAAAT GGCACAGGCT TCCCCAACAA ACTGAAGGCG GAGCAAATCC CAATGCCGGC AAGAATTTTG GGGGTAGTAA GCGATTATGT TCAGCTGCAT CGCGGGCGTA TGTGCTCTGG GGTAGAGGGC CATGCAATGG CGCGTAAATA TATCGAATCT CGCATTGCAT GGCATTACGA CATAGCCGTG GTGAAACATT TTTTTGAGCA AGTAGATGAT GCAGCACTCA ACTATATTTC TACTATACTT GCCTCAGAGG TGCATGAGTT GCAGCCAGGT ATGATTCTGG CTAATGACAT ACGCACCCAC AATAAGGTTT TACTGCTGCC TGCAGGGGTA AAACTGAATC AAAATCAAAT TAACAAAATT GAACTCTATG AACGCTTTGC TAAAACAAAG TTAATAGTGA ATATTGTTAA TACAAGCTAA
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Protein sequence | MAKQAMAPND CSSVTLLFVD DELPILKAFK RLVRGKNWTV YCAESAQQGI QILSQNNVDI VVSDMRMPNM NGAQFLSYVR DNHPQAQRIL ITGYSDLQSL QSAINEAKIS NYISKPWEDE ALLDVLQKTV DIQEGEKERR RLELVKKSQN KKLGRLALSL NSQVNEKSME VNQALTLLEM ERNHAQMRVH ELTHAVLKLL GLSGKGRSYG AFIAESATAV GRAIGLSALE LENLYIAAAL HNIGYLVLGE REMIEDANEQ ENEHSEQYKA QVAISEEILN GMPALAPVAS IIATHKERLN GTGFPNKLKA EQIPMPARIL GVVSDYVQLH RGRMCSGVEG HAMARKYIES RIAWHYDIAV VKHFFEQVDD AALNYISTIL ASEVHELQPG MILANDIRTH NKVLLLPAGV KLNQNQINKI ELYERFAKTK LIVNIVNTS
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