More than 300 homologs were found in PanDaTox collection
for query gene LEUM_1208 on replicon NC_008531
Organism: Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008531  LEUM_1208  carbamoyl-phosphate synthase small subunit  100 
 
 
361 aa  750    Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  unclonable  0.0000951644  n/a   
 
 
-
 
NC_008528  OEOE_0260  carbamoyl-phosphate synthase small subunit  65.92 
 
 
363 aa  509  1e-143  Oenococcus oeni PSU-1  Bacteria  normal  0.734432  n/a   
 
 
-
 
NC_008527  LACR_1709  carbamoyl phosphate synthase small subunit  58.77 
 
 
357 aa  458  9.999999999999999e-129  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_0558  carbamoyl phosphate synthase small subunit  58.64 
 
 
362 aa  451  1.0000000000000001e-126  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1043  carbamoyl phosphate synthase small subunit  58.1 
 
 
358 aa  444  1.0000000000000001e-124  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1088  carbamoyl phosphate synthase small subunit  53.46 
 
 
362 aa  425  1e-118  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_0086  carbamoyl phosphate synthase small subunit  54.34 
 
 
362 aa  422  1e-117  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.000481793  n/a   
 
 
-
 
NC_002976  SERP0768  carbamoyl phosphate synthase small subunit  50.97 
 
 
366 aa  390  1e-107  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1286  carbamoyl phosphate synthase small subunit  51.82 
 
 
366 aa  388  1e-107  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.510283  n/a   
 
 
-
 
NC_009487  SaurJH9_1261  carbamoyl phosphate synthase small subunit  51.82 
 
 
366 aa  388  1e-107  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1916  carbamoyl phosphate synthase small subunit  52.38 
 
 
364 aa  387  1e-106  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_2536  carbamoyl phosphate synthase small subunit  51.26 
 
 
373 aa  386  1e-106  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0261621  n/a   
 
 
-
 
NC_005945  BAS3738  carbamoyl phosphate synthase small subunit  50.7 
 
 
365 aa  382  1e-105  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3629  carbamoyl phosphate synthase small subunit  50.7 
 
 
365 aa  382  1e-105  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3646  carbamoyl phosphate synthase small subunit  50.7 
 
 
365 aa  382  1e-105  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3985  carbamoyl phosphate synthase small subunit  50.7 
 
 
365 aa  383  1e-105  Bacillus cereus B4264  Bacteria  normal  0.289727  n/a   
 
 
-
 
NC_007530  GBAA_4026  carbamoyl phosphate synthase small subunit  50.7 
 
 
365 aa  382  1e-105  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0667428  n/a   
 
 
-
 
NC_012793  GWCH70_1046  carbamoyl phosphate synthase small subunit  50.98 
 
 
364 aa  384  1e-105  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3901  carbamoyl phosphate synthase small subunit  50.7 
 
 
365 aa  382  1e-105  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000355158 
 
 
-
 
NC_003909  BCE_3932  carbamoyl phosphate synthase small subunit  50.42 
 
 
365 aa  381  1e-104  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3936  carbamoyl phosphate synthase small subunit  50.42 
 
 
365 aa  381  1e-104  Bacillus cereus AH187  Bacteria  normal  0.0146429  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3714  carbamoyl phosphate synthase small subunit  49.86 
 
 
365 aa  378  1e-104  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.971369  n/a   
 
 
-
 
NC_014150  Bmur_2483  carbamoyl-phosphate synthase, small subunit  50.56 
 
 
359 aa  381  1e-104  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0000863462  n/a   
 
 
-
 
NC_011772  BCG9842_B1256  carbamoyl phosphate synthase small subunit  49.86 
 
 
365 aa  379  1e-104  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  51.7 
 
 
357 aa  377  1e-103  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  51.29 
 
 
359 aa  364  1e-99  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_011898  Ccel_0615  carbamoyl-phosphate synthase, small subunit  48.74 
 
 
360 aa  353  2e-96  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  47.35 
 
 
361 aa  347  2e-94  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_2898  carbamoyl phosphate synthase small subunit  48.85 
 
 
349 aa  344  1e-93  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  46.5 
 
 
358 aa  343  2.9999999999999997e-93  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_008262  CPR_2577  carbamoyl phosphate synthase small subunit  48.56 
 
 
349 aa  342  4e-93  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  46.35 
 
 
359 aa  341  1e-92  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  47.11 
 
 
369 aa  336  2.9999999999999997e-91  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  45.4 
 
 
368 aa  335  5.999999999999999e-91  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1307  carbamoyl-phosphate synthase, small subunit  47.91 
 
 
368 aa  333  3e-90  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  47.11 
 
 
367 aa  332  5e-90  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  44.18 
 
 
389 aa  331  9e-90  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  47.79 
 
 
369 aa  331  1e-89  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  45.84 
 
 
379 aa  330  2e-89  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  46.61 
 
 
391 aa  329  4e-89  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  45.9 
 
 
383 aa  329  5.0000000000000004e-89  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  43.1 
 
 
356 aa  328  1.0000000000000001e-88  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  45.45 
 
 
359 aa  328  1.0000000000000001e-88  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  44.5 
 
 
376 aa  327  2.0000000000000001e-88  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  46.37 
 
 
367 aa  327  3e-88  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2913  carbamoyl-phosphate synthase, small subunit  45.17 
 
 
351 aa  326  5e-88  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0661  carbamoyl phosphate synthase small subunit  45.28 
 
 
356 aa  325  7e-88  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  44.3 
 
 
388 aa  325  8.000000000000001e-88  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  45.19 
 
 
384 aa  325  8.000000000000001e-88  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  46.96 
 
 
369 aa  322  7e-87  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  46.83 
 
 
371 aa  320  1.9999999999999998e-86  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  45.08 
 
 
385 aa  320  3e-86  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  44.65 
 
 
380 aa  319  3.9999999999999996e-86  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  44.65 
 
 
380 aa  319  3.9999999999999996e-86  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  43.9 
 
 
377 aa  319  3.9999999999999996e-86  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_1011  carbamoyl phosphate synthase small subunit  43.33 
 
 
364 aa  318  7.999999999999999e-86  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  47.35 
 
 
366 aa  318  1e-85  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_984  carbamoyl-phosphate synthase, small subunit  45.03 
 
 
364 aa  317  2e-85  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_02880  carbamoyl-phosphate synthase, small subunit  43.22 
 
 
364 aa  317  2e-85  Halothermothrix orenii H 168  Bacteria  normal  0.422195  n/a   
 
 
-
 
NC_002936  DET1201  carbamoyl phosphate synthase small subunit  44.2 
 
 
364 aa  314  9.999999999999999e-85  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  45.01 
 
 
372 aa  314  1.9999999999999998e-84  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  43.11 
 
 
392 aa  314  1.9999999999999998e-84  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_009943  Dole_0120  carbamoyl-phosphate synthase, small subunit  43.85 
 
 
380 aa  313  2.9999999999999996e-84  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  43.24 
 
 
391 aa  313  2.9999999999999996e-84  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  43.11 
 
 
392 aa  313  3.9999999999999997e-84  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1363  carbamoyl phosphate synthase small subunit  43.79 
 
 
356 aa  311  1e-83  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.013904  n/a   
 
 
-
 
NC_010001  Cphy_0540  carbamoyl phosphate synthase small subunit  40.24 
 
 
420 aa  310  2.9999999999999997e-83  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1915  carbamoyl-phosphate synthase, small subunit  42.67 
 
 
390 aa  307  2.0000000000000002e-82  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2445  carbamoyl-phosphate synthase, small subunit  42.86 
 
 
399 aa  307  2.0000000000000002e-82  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_2670  carbamoyl-phosphate synthase, small subunit  43.18 
 
 
351 aa  307  2.0000000000000002e-82  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1071  carbamoyl-phosphate synthase, small subunit  42.08 
 
 
369 aa  303  2.0000000000000002e-81  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0749952  normal  0.228018 
 
 
-
 
NC_012793  GWCH70_0740  carbamoyl phosphate synthase small subunit  43.22 
 
 
356 aa  302  7.000000000000001e-81  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  41.19 
 
 
373 aa  301  1e-80  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0133  carbamoyl-phosphate synthase, small subunit  42.36 
 
 
378 aa  300  2e-80  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  42.4 
 
 
386 aa  300  2e-80  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  42.13 
 
 
386 aa  300  3e-80  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_010730  SYO3AOP1_1361  carbamoyl phosphate synthase small subunit  43.01 
 
 
376 aa  297  2e-79  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  41.6 
 
 
379 aa  297  2e-79  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1982  carbamoyl-phosphate synthase small subunit  44.2 
 
 
386 aa  297  2e-79  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.157941  normal  0.0125598 
 
 
-
 
NC_013037  Dfer_4372  carbamoyl phosphate synthase small subunit  43.68 
 
 
368 aa  297  2e-79  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_0930  carbamoyl phosphate synthase small subunit  40.96 
 
 
361 aa  296  3e-79  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2729  carbamoyl-phosphate synthase small subunit  41.91 
 
 
387 aa  296  3e-79  Saccharophagus degradans 2-40  Bacteria  normal  0.422158  normal 
 
 
-
 
NC_011883  Ddes_1097  carbamoyl phosphate synthase small subunit  41.18 
 
 
376 aa  296  4e-79  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.643284  n/a   
 
 
-
 
NC_010717  PXO_00088  carbamoyl phosphate synthase small subunit  43.72 
 
 
390 aa  296  4e-79  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.562291  n/a   
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  42.51 
 
 
373 aa  296  5e-79  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_007955  Mbur_0871  carbamoyl phosphate synthase small subunit  43.63 
 
 
365 aa  295  6e-79  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  42.25 
 
 
373 aa  295  7e-79  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_013132  Cpin_1645  carbamoyl phosphate synthase small subunit  40.96 
 
 
369 aa  295  7e-79  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_2060  carbamoyl phosphate synthase small subunit  42.43 
 
 
394 aa  295  9e-79  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_007796  Mhun_0114  carbamoyl-phosphate synthase, small subunit  42.86 
 
 
351 aa  294  1e-78  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  41.98 
 
 
373 aa  293  2e-78  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007335  PMN2A_0259  carbamoyl phosphate synthase small subunit  39.95 
 
 
384 aa  294  2e-78  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02244  carbamoyl-phosphate synthase small subunit  42.32 
 
 
440 aa  293  2e-78  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0231375  n/a   
 
 
-
 
NC_010506  Swoo_3578  carbamoyl phosphate synthase small subunit  42.74 
 
 
381 aa  294  2e-78  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0674639  normal  0.11278 
 
 
-
 
NC_010003  Pmob_1699  carbamoyl phosphate synthase small subunit  41.83 
 
 
347 aa  294  2e-78  Petrotoga mobilis SJ95  Bacteria  normal  0.213064  n/a   
 
 
-
 
NC_008700  Sama_2504  carbamoyl phosphate synthase small subunit  42.44 
 
 
381 aa  294  2e-78  Shewanella amazonensis SB2B  Bacteria  normal  0.323519  normal 
 
 
-
 
NC_008819  NATL1_09281  carbamoyl phosphate synthase small subunit  40.37 
 
 
384 aa  293  3e-78  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.87193  normal  0.0301636 
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  40.91 
 
 
379 aa  293  3e-78  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_008148  Rxyl_1478  carbamoyl-phosphate synthase small subunit  42.22 
 
 
369 aa  293  3e-78  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.515532  n/a   
 
 
-
 
NC_010085  Nmar_1086  carbamoyl-phosphate synthase small subunit  41.6 
 
 
384 aa  293  3e-78  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
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