| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0871 |
|---|
| Symbol | |
|---|
| ID | 3996869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | + |
|---|
| Start bp | 923158 |
|---|
| End bp | 924255 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637958655 |
|---|
| Product | carbamoyl phosphate synthase small subunit |
|---|
| Protein accession | YP_565571 |
|---|
| Protein GI | 91772879 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
|---|
| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGGATG CAGTAATAGG ATTAGAAGAT GGAACGTTTT TAAAAGGTAC CGGTTTCGGT
GCTGAAGGTA TCGTTTGCGG AGAGCTTGTT TTCACTACTC AGTACACAGG TTATGAGGAA
TCACTGACAG ACCCTTCATA CAGCGGTCAG ATCTTGATGT TCACATATCC TCTTATCGGA
AATTATGGGG TCAATGATGA GACCTTTCAG TCCGACGGTG TAAAGGTCGA GGGCCTTGTT
GTAAGGGAAG CATGTCGGTC TCCAAGTCAC CACCAATCCA TGCGTAATAT CTACAAGCTG
ATGGAAGATG AGGGAAAGCC CGGAATATCC GGAGTTGACA CTCGTATGCT CACCATCGGT
ACTAGAGAGC ATGGTACCAT GCGTGCTGCA CTTATCAATG GCAGTGACGA TGGTGAAGAG
GCTGTAAGGC TGGCGAGAGC ACAGCCGGAT ATATCCAGTC TCGACCTGAT CTCAAGGGTT
ACCTGCAAAG AACCCTACAT CATAAAAAGT CAGGTCAATA CCGATGACAA GAAAAATGTC
GTACTTATCG ACCTCGGTAT GAAAAAGAAT ATTTCTACAA GTCTATTGAA CAGAGGCATT
GATGTTACAG TGGTACCAGC TACCACACCC GCTTCTGTAA TTCAGGAATT TGATCCTGAT
CTTTTATTCC TGTCCAACGG ACCAGGTGAC CCACAAAATG CAAACGCAGC CATAGACGCA
GTAAAAGAAA TGGCAGGAAC TGTTCCTATT GCAGGAATAT GCCTTGGTCA TCAGATCATT
GCAAGGGCAC TTGGAGCTGA CACATACAAG CTCAAGTTCG GACACCGCGG AGCAAACCAG
CCGGTCAAGG ACCTTGAAAC AGGAATTGTA CACATAACTT CACAGAATCA CGGATTCGCT
GTGGAAGGAG ATTCCTTCGA TGACACTGAT GTAATTGTCA CACAGATCAA TACCAATGAC
AGGACCGTGG AAGGTATCGA GCAGAAGGAC CTCGATATAT TCAGTGTTCA GTATCATCCG
GAAGCACATG CCGGTCCGAG AGATACAGAG AAGATCTTCT TTGGAAAGGT CATGAAAGCT
ATGGGAGGCA GGGTATAA
|
|---|
| Protein sequence | MMDAVIGLED GTFLKGTGFG AEGIVCGELV FTTQYTGYEE SLTDPSYSGQ ILMFTYPLIG
NYGVNDETFQ SDGVKVEGLV VREACRSPSH HQSMRNIYKL MEDEGKPGIS GVDTRMLTIG
TREHGTMRAA LINGSDDGEE AVRLARAQPD ISSLDLISRV TCKEPYIIKS QVNTDDKKNV
VLIDLGMKKN ISTSLLNRGI DVTVVPATTP ASVIQEFDPD LLFLSNGPGD PQNANAAIDA
VKEMAGTVPI AGICLGHQII ARALGADTYK LKFGHRGANQ PVKDLETGIV HITSQNHGFA
VEGDSFDDTD VIVTQINTND RTVEGIEQKD LDIFSVQYHP EAHAGPRDTE KIFFGKVMKA
MGGRV
|
|---|
| |