| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_1086 |
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| Symbol | |
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| ID | 5774538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 989810 |
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| End bp | 990964 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641316728 |
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| Product | carbamoyl-phosphate synthase small subunit |
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| Protein accession | YP_001582420 |
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| Protein GI | 161528594 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCTGAGGG TCACAATATC CACAAAGAAA TCAACTCACG CAAAAAAGTT TGGAAAGCTC
ATTTTTGATG ATGGAACTGT TCTTGACGGT GAAGGATTCG GATATTCGAC GACTGTTTTT
GGTGAAATTG TGTTCAATAC TGGAATGGTT GGGTATACAG AAGCACTAAC TGACCCATCC
TACAAAGGCC AAATTCTTAC ACTAACTTAT CCACTTGTTG GAAATTATGG AGTTCCCGAT
CCAGAAGTTA AAGATGACGA TGGAATTCCA AAATATTTTG AAGCCAATGA AATCCAAGCT
AGAGGTCTTG TAATACATGA ACTATCTCAT ACTGCAAGTC ACTGGAATCT ATCCATGACT
TTGGATGAAT GGATGTACAA TGAAAAAATT CCAGGAATTG CTGAAATTGA TACTAGGGCA
TTAACAAAAA AACTTAGAAC TAGTGGTGTC ATGATGGCTG CTCTAGTAGT CTCAGATACT
GAGATTGATG TAGAAGCAGT CAAAAAACAG CTTTCTGAGG CTACAAATTA CAATTCTGAA
CAGTTTATGG ATGCAGTATC CACCAAGGAA GAAAAAGTCT ATGGAAACGA AGAGCAGACA
GTTGTTGTAA TTGACACTGG TGCAAAATTT GCAATTATTA GAAATGTTAG AGAACTTGGT
TACAAAGTAG TTGTTGTCCC ATGGAATACT TCATATGAAA AAATAATGTC ATACAATCCA
AAAGGAATTG TTTTGAGCAG TGGTCCTGGT GATCCTCAAA ACTGTCCTGC AACAATTGAA
ACAACTAAAA AATTAATTGA AAATAATATA CCAACACTTG GAATTTGTCT TGGTGCACAA
ATAATTGGAA TTGCAGGAAA CACTGAAACT TACAAACTAA AGTATGGACA CCGTGGACAA
AACAAACCAT GTGTTAACTT GGAGACAAAT CAAGTCTATG TCACAAGTCA AAATCATGGT
TATGGAATAA AACCTGAATC CCTTGAAAAA TCTGATTTTA ATTTATGGTT TACAAATGCT
GATGACAAAA CAGTCGAAGG AATAAAACAC AAAACAAAGA GGTGTATTGC AGTACAATTT
CATCCTGAAG CTGCACCTGG TCCTTTTGAT TGCAAGTATG TTTTTGAAGA ACTAAAGGAA
CTAATGGAGA AATAA
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| Protein sequence | MLRVTISTKK STHAKKFGKL IFDDGTVLDG EGFGYSTTVF GEIVFNTGMV GYTEALTDPS
YKGQILTLTY PLVGNYGVPD PEVKDDDGIP KYFEANEIQA RGLVIHELSH TASHWNLSMT
LDEWMYNEKI PGIAEIDTRA LTKKLRTSGV MMAALVVSDT EIDVEAVKKQ LSEATNYNSE
QFMDAVSTKE EKVYGNEEQT VVVIDTGAKF AIIRNVRELG YKVVVVPWNT SYEKIMSYNP
KGIVLSSGPG DPQNCPATIE TTKKLIENNI PTLGICLGAQ IIGIAGNTET YKLKYGHRGQ
NKPCVNLETN QVYVTSQNHG YGIKPESLEK SDFNLWFTNA DDKTVEGIKH KTKRCIAVQF
HPEAAPGPFD CKYVFEELKE LMEK
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