More than 300 homologs were found in PanDaTox collection
for query gene Gbro_2452 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013441  Gbro_2452  HAD-superfamily hydrolase, subfamily IA, variant 3  100 
 
 
232 aa  454  1e-127  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2212  HAD-superfamily hydrolase, subfamily IA, variant 3  54.11 
 
 
220 aa  223  2e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2146  HAD-superfamily hydrolase, subfamily IA, variant 3  50.51 
 
 
213 aa  195  6e-49  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3473  HAD family hydrolase  50.23 
 
 
243 aa  191  7e-48  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3054  HAD family hydrolase  47.62 
 
 
224 aa  179  2.9999999999999997e-44  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.751068  normal  0.223571 
 
 
-
 
NC_013159  Svir_22200  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  48.04 
 
 
217 aa  172  5.999999999999999e-42  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.172111  normal 
 
 
-
 
NC_009077  Mjls_3160  HAD family hydrolase  51.4 
 
 
228 aa  171  9e-42  Mycobacterium sp. JLS  Bacteria  normal  0.0720917  normal  0.533727 
 
 
-
 
NC_008146  Mmcs_3148  HAD family hydrolase  51.4 
 
 
228 aa  171  9e-42  Mycobacterium sp. MCS  Bacteria  normal  0.0274068  n/a   
 
 
-
 
NC_008705  Mkms_3210  HAD family hydrolase  51.4 
 
 
228 aa  171  9e-42  Mycobacterium sp. KMS  Bacteria  normal  0.742759  normal  0.278604 
 
 
-
 
NC_013947  Snas_4498  HAD-superfamily hydrolase subfamily IA, variant 3  44.21 
 
 
223 aa  150  1e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.511661  normal  0.0143777 
 
 
-
 
NC_009380  Strop_2232  HAD family hydrolase  48.17 
 
 
233 aa  149  5e-35  Salinispora tropica CNB-440  Bacteria  normal  0.470588  normal 
 
 
-
 
NC_009953  Sare_2349  HAD family hydrolase  47.87 
 
 
215 aa  148  9e-35  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.355354 
 
 
-
 
NC_008699  Noca_2632  HAD family hydrolase  44.55 
 
 
218 aa  147  2.0000000000000003e-34  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2637  HAD family hydrolase  45.36 
 
 
286 aa  143  2e-33  Frankia sp. CcI3  Bacteria  normal  0.403398  normal  0.292856 
 
 
-
 
NC_013235  Namu_2787  HAD-superfamily hydrolase, subfamily IA, variant 3  39.13 
 
 
230 aa  142  7e-33  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00137861  hitchhiker  0.0000132599 
 
 
-
 
NC_009664  Krad_1843  HAD-superfamily hydrolase, subfamily IA, variant 3  47.03 
 
 
241 aa  136  3.0000000000000003e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.101722  normal 
 
 
-
 
NC_013595  Sros_5916  HAD family hydrolase  41.29 
 
 
218 aa  133  1.9999999999999998e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0345843  normal  0.0351614 
 
 
-
 
NC_013757  Gobs_2673  HAD-superfamily hydrolase, subfamily IA, variant 3  41.7 
 
 
248 aa  130  1.0000000000000001e-29  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.649761  n/a   
 
 
-
 
NC_013510  Tcur_2293  HAD-superfamily hydrolase, subfamily IA, variant 3  44.06 
 
 
218 aa  130  2.0000000000000002e-29  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000494788  n/a   
 
 
-
 
NC_013131  Caci_2412  HAD-superfamily hydrolase, subfamily IA, variant 3  41.21 
 
 
222 aa  129  5.0000000000000004e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1481  HAD-superfamily hydrolase, subfamily IA, variant 3  44.04 
 
 
233 aa  128  9.000000000000001e-29  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2245  HAD-superfamily hydrolase, subfamily IA, variant 3  40.38 
 
 
247 aa  126  4.0000000000000003e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.56873  normal 
 
 
-
 
NC_014210  Ndas_1550  HAD-superfamily hydrolase, subfamily IA, variant 3  38.46 
 
 
249 aa  122  3e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.204001 
 
 
-
 
NC_013521  Sked_20940  haloacid dehalogenase superfamily enzyme, subfamily IA  38.29 
 
 
273 aa  122  6e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.650807 
 
 
-
 
NC_013169  Ksed_13910  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  41.15 
 
 
232 aa  120  9.999999999999999e-27  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.491881  normal 
 
 
-
 
NC_009921  Franean1_4889  HAD family hydrolase  43.16 
 
 
233 aa  120  3e-26  Frankia sp. EAN1pec  Bacteria  normal  0.351284  normal  0.0730929 
 
 
-
 
NC_013595  Sros_7385  HAD-superfamily hydrolase, subfamily IA  37.78 
 
 
248 aa  114  8.999999999999998e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1197  HAD-superfamily hydrolase, subfamily IA, variant 3  40.41 
 
 
225 aa  114  1.0000000000000001e-24  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0955551  normal  0.148864 
 
 
-
 
NC_014165  Tbis_1853  HAD-superfamily hydrolase  37.89 
 
 
213 aa  113  3e-24  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_11830  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  37.61 
 
 
246 aa  112  6e-24  Micrococcus luteus NCTC 2665  Bacteria  normal  0.0867005  n/a   
 
 
-
 
NC_007333  Tfu_1824  HAD family hydrolase  39.2 
 
 
222 aa  108  5e-23  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0780  HAD family hydrolase  35.94 
 
 
227 aa  104  9e-22  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1913  HAD-superfamily hydrolase, subfamily IA, variant 3  35.16 
 
 
245 aa  103  3e-21  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000014808 
 
 
-
 
NC_008578  Acel_1175  HAD family hydrolase  38.92 
 
 
263 aa  100  1e-20  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4817  HAD-superfamily hydrolase, subfamily IA, variant 3  36.02 
 
 
235 aa  99.4  4e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.821962  n/a   
 
 
-
 
NC_010501  PputW619_2172  HAD family hydrolase  35.1 
 
 
710 aa  98.6  7e-20  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1034  hydrolase  34.76 
 
 
217 aa  97.4  1e-19  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1460  HAD family hydrolase  37.44 
 
 
229 aa  98.2  1e-19  Ruegeria sp. TM1040  Bacteria  hitchhiker  0.00552213  normal  0.266811 
 
 
-
 
NC_013721  HMPREF0424_1278  HAD hydrolase, family IA, variant 3  32.65 
 
 
247 aa  97.8  1e-19  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009512  Pput_3689  HAD family hydrolase  33.98 
 
 
707 aa  97.4  2e-19  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010513  Xfasm12_0542  hydrolase  39.09 
 
 
225 aa  97.1  2e-19  Xylella fastidiosa M12  Bacteria  normal  0.491879  n/a   
 
 
-
 
NC_014151  Cfla_2008  HAD-superfamily hydrolase, subfamily IA, variant 3  37.22 
 
 
213 aa  96.3  4e-19  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.296794  normal 
 
 
-
 
NC_002947  PP_2052  HAD superfamily hydrolase  33.5 
 
 
707 aa  95.5  7e-19  Pseudomonas putida KT2440  Bacteria  normal  0.380026  normal 
 
 
-
 
NC_011071  Smal_0452  HAD-superfamily hydrolase, subfamily IA, variant 3  37.26 
 
 
227 aa  95.1  8e-19  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010577  XfasM23_0479  HAD family hydrolase  38.64 
 
 
225 aa  94.7  1e-18  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2195  HAD-superfamily hydrolase, subfamily IA, variant 3  35.37 
 
 
224 aa  92  8e-18  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1571  HAD family hydrolase  32.52 
 
 
714 aa  91.7  8e-18  Pseudomonas putida GB-1  Bacteria  normal  normal  0.882263 
 
 
-
 
NC_007958  RPD_3933  HAD family hydrolase  36 
 
 
271 aa  91.7  1e-17  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1286  HAD family hydrolase  34.83 
 
 
229 aa  90.1  3e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_03084  HAD superfamily hydrolase  37.82 
 
 
226 aa  90.1  3e-17  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1305  beta-phosphoglucomutase  33.89 
 
 
223 aa  89  7e-17  Bifidobacterium longum DJO10A  Bacteria  normal  0.396501  n/a   
 
 
-
 
NC_011661  Dtur_0461  HAD-superfamily hydrolase, subfamily IA, variant 3  31.02 
 
 
217 aa  88.6  8e-17  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0935  HAD family hydrolase  32.64 
 
 
235 aa  87.8  1e-16  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.941543  normal 
 
 
-
 
NC_007492  Pfl01_1752  HAD family hydrolase  35.05 
 
 
232 aa  87.8  1e-16  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4152  HAD family hydrolase  33.16 
 
 
217 aa  87  2e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3378  2-deoxyglucose-6-phosphatase  33.69 
 
 
225 aa  87.4  2e-16  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2170  HAD family hydrolase  34.5 
 
 
263 aa  87  2e-16  Arthrobacter sp. FB24  Bacteria  normal  0.156461  n/a   
 
 
-
 
NC_011899  Hore_10160  HAD-superfamily hydrolase, subfamily IA, variant 3  30.6 
 
 
217 aa  86.7  3e-16  Halothermothrix orenii H 168  Bacteria  normal  0.64096  n/a   
 
 
-
 
NC_009092  Shew_3425  2-deoxyglucose-6-phosphatase  35.98 
 
 
223 aa  86.3  4e-16  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000919178  normal 
 
 
-
 
NC_013172  Bfae_25290  haloacid dehalogenase superfamily enzyme, subfamily IA  34.58 
 
 
244 aa  85.9  5e-16  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0218735  n/a   
 
 
-
 
NC_010682  Rpic_0122  HAD-superfamily hydrolase, subfamily IA, variant 3  34.19 
 
 
229 aa  85.9  6e-16  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1268  HAD family hydrolase  32.59 
 
 
215 aa  85.5  7e-16  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0432  2-deoxyglucose-6-phosphatase  32.65 
 
 
218 aa  85.1  8e-16  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000498152  normal 
 
 
-
 
NC_008700  Sama_0381  2-deoxyglucose-6-phosphatase  34.39 
 
 
221 aa  85.1  8e-16  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0071153  normal  0.324571 
 
 
-
 
NC_008819  NATL1_06771  phosphatase/phosphohexomutase  35.5 
 
 
226 aa  85.1  9e-16  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0130  HAD-superfamily hydrolase, subfamily IA, variant 3  34.19 
 
 
232 aa  84.7  0.000000000000001  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0431  2-deoxyglucose-6-phosphatase  32.99 
 
 
217 aa  83.6  0.000000000000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007973  Rmet_1517  HAD family hydrolase  33.81 
 
 
272 aa  84  0.000000000000002  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00550293  decreased coverage  0.0000688846 
 
 
-
 
NC_009012  Cthe_3073  HAD family hydrolase  31.77 
 
 
223 aa  84  0.000000000000002  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00582956  n/a   
 
 
-
 
NC_008148  Rxyl_0905  HAD family hydrolase  33.16 
 
 
204 aa  84  0.000000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.427836  n/a   
 
 
-
 
NC_010831  Cphamn1_0520  HAD-superfamily hydrolase, subfamily IA, variant 3  35.2 
 
 
217 aa  84  0.000000000000002  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2469  HAD-superfamily hydrolase, subfamily IA, variant 3  34.42 
 
 
224 aa  84  0.000000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.618161  n/a   
 
 
-
 
NC_013093  Amir_7029  HAD-superfamily hydrolase, subfamily IA, variant 3  34.57 
 
 
213 aa  83.2  0.000000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2136  HAD-superfamily hydrolase, subfamily IA, variant 3  32.28 
 
 
219 aa  83.2  0.000000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.101925  n/a   
 
 
-
 
NC_008322  Shewmr7_3593  2-deoxyglucose-6-phosphatase  32.14 
 
 
218 aa  83.2  0.000000000000003  Shewanella sp. MR-7  Bacteria  unclonable  0.0000011766  normal  0.672534 
 
 
-
 
NC_010483  TRQ2_1566  HAD family hydrolase  30.11 
 
 
216 aa  83.2  0.000000000000003  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_007335  PMN2A_0056  HAD family hydrolase  32.52 
 
 
226 aa  82.8  0.000000000000004  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1517  HAD family hydrolase  30.11 
 
 
216 aa  82.8  0.000000000000004  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2075  HAD family hydrolase  33.68 
 
 
217 aa  82.8  0.000000000000004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  decreased coverage  0.00099021 
 
 
-
 
NC_011369  Rleg2_0846  HAD-superfamily hydrolase, subfamily IA, variant 3  30.37 
 
 
231 aa  82.4  0.000000000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.814852 
 
 
-
 
NC_013457  VEA_000391  2-deoxyglucose-6-phosphate hydrolase YniC  30.11 
 
 
218 aa  82.4  0.000000000000005  Vibrio sp. Ex25  Bacteria  normal  0.0106831  n/a   
 
 
-
 
NC_013457  VEA_001299  CbbY family protein  31.35 
 
 
216 aa  82.8  0.000000000000005  Vibrio sp. Ex25  Bacteria  normal  0.916657  n/a   
 
 
-
 
NC_007604  Synpcc7942_1351  HAD family hydrolase  29.59 
 
 
236 aa  82  0.000000000000006  Synechococcus elongatus PCC 7942  Bacteria  decreased coverage  0.00941248  normal 
 
 
-
 
NC_009456  VC0395_0037  haloacid dehalogenase/epoxide hydrolase family protein  31.68 
 
 
219 aa  80.9  0.00000000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1478  HAD-superfamily hydrolase, subfamily IA, variant 3  35.94 
 
 
220 aa  81.3  0.00000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0104021  normal  0.265718 
 
 
-
 
NC_003295  RSc0271  hypothetical protein  35.94 
 
 
229 aa  81.6  0.00000000000001  Ralstonia solanacearum GMI1000  Bacteria  normal  0.586518  normal 
 
 
-
 
NC_007925  RPC_4133  HAD family hydrolase  36.76 
 
 
223 aa  80.9  0.00000000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2846  HAD-superfamily hydrolase, subfamily IA, variant 3  35.26 
 
 
226 aa  81.3  0.00000000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.281035  normal  0.462582 
 
 
-
 
NC_013159  Svir_32070  haloacid dehalogenase superfamily enzyme, subfamily IA  33.51 
 
 
227 aa  81.3  0.00000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.466176  normal  0.444114 
 
 
-
 
NC_002977  MCA2733  HAD-superfamily hydrolase, subfamily IA, variant 3 family protein  32.88 
 
 
237 aa  80.5  0.00000000000002  Methylococcus capsulatus str. Bath  Bacteria  normal  0.53567  n/a   
 
 
-
 
NC_007952  Bxe_B1761  HAD family hydrolase  33.66 
 
 
230 aa  80.5  0.00000000000002  Burkholderia xenovorans LB400  Bacteria  normal  0.0120798  normal  0.0416472 
 
 
-
 
NC_011831  Cagg_1516  HAD-superfamily hydrolase, subfamily IA, variant 3  34.18 
 
 
227 aa  80.5  0.00000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_3772  2-deoxyglucose-6-phosphatase  32.62 
 
 
218 aa  80.5  0.00000000000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3410  2-deoxyglucose-6-phosphatase  32.08 
 
 
217 aa  80.5  0.00000000000002  Shewanella putrefaciens CN-32  Bacteria  normal  0.0110715  n/a   
 
 
-
 
NC_009485  BBta_1791  putative haloacid dehalogenase/epoxide hydrolase  34.5 
 
 
218 aa  79.7  0.00000000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_2790  HAD family hydrolase  26.61 
 
 
223 aa  80.1  0.00000000000003  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3319  HAD-superfamily hydrolase, subfamily IA, variant 3  38.25 
 
 
224 aa  80.1  0.00000000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.168668  normal 
 
 
-
 
NC_010003  Pmob_0452  HAD family hydrolase  30.48 
 
 
221 aa  79.7  0.00000000000003  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2488  HAD family hydrolase  31.98 
 
 
237 aa  79.7  0.00000000000004  Thermobifida fusca YX  Bacteria  normal  0.271509  n/a   
 
 
-
 
NC_007947  Mfla_1729  HAD family hydrolase  31.18 
 
 
728 aa  79.3  0.00000000000005  Methylobacillus flagellatus KT  Bacteria  normal  0.696153  hitchhiker  0.000289006 
 
 
-
 
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