| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1034 |
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| Symbol | |
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| ID | 7387123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 876863 |
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| End bp | 877516 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643650531 |
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| Product | hydrolase |
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| Protein accession | YP_002548739 |
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| Protein GI | 222147782 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCCCC GCACCCCCAA AGCCGTTATT TTCGACATGG ATGGTCTCAT CCTCGACAGC
GAAATTCTCT ATCGGAAATC GGTGATTTCG GCAGGGGTGC AAGCGGGGCT GCTTGTCGGG
CCATCGGTTT ATGAAGGCAT GCTGGGCCGA CCCTGGGACG GGATCGTGCA TTTATTGAAG
GACCATTATG GGCCGGATTT CGACGCCGAA GCCTTTCGGG CAGTCTGGGT GGACCATTTT
GATCGGTTGA CCGCCCTGGA ACTGAAACTA AAGGCGGGTG TCGTGGCCCT GCTCGATATG
CTGGATGCCA AGGCCATTCC ACGGGCTATC TGCACATCTT CCGCACATTC TCAAGTGCAA
CACCATCTGG CCGGCTTTGG CATTCGAGAG CGGTTCGATC ACGTCATTGC TTTAGGCGAC
TACGCCAGGG GCAAGCCTGC GCCGGACCCT TATCTGACCG CTGCCGAGCG GCTTGGCATT
GCACCCGGCG ATTGTCTGGC ATTGGAAGAT TCCCACAATG GCATTCGCTC GGCAGCCTCG
GCGGGTATGA TGGCGGTGAT GGTACCCGAT CTCCTGGCAC CGACCGATGA AATTCGGGCG
CTGGCAACAT TGGTCATCGA TGATCTGCAC CAATGCTGCG GCTTTTTTGC ATAA
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| Protein sequence | MLPRTPKAVI FDMDGLILDS EILYRKSVIS AGVQAGLLVG PSVYEGMLGR PWDGIVHLLK
DHYGPDFDAE AFRAVWVDHF DRLTALELKL KAGVVALLDM LDAKAIPRAI CTSSAHSQVQ
HHLAGFGIRE RFDHVIALGD YARGKPAPDP YLTAAERLGI APGDCLALED SHNGIRSAAS
AGMMAVMVPD LLAPTDEIRA LATLVIDDLH QCCGFFA
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