More than 300 homologs were found in PanDaTox collection
for query gene Dbac_2136 on replicon NC_013173
Organism: Desulfomicrobium baculatum DSM 4028



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013173  Dbac_2136  HAD-superfamily hydrolase, subfamily IA, variant 3  100 
 
 
219 aa  442  1e-123  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.101925  n/a   
 
 
-
 
NC_007643  Rru_A1268  HAD family hydrolase  39.33 
 
 
215 aa  120  9.999999999999999e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1550  HAD-superfamily hydrolase, subfamily IA, variant 3  37.82 
 
 
249 aa  88.2  8e-17  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.204001 
 
 
-
 
NC_013526  Tter_2485  HAD-superfamily hydrolase, subfamily IA, variant 3  33.33 
 
 
238 aa  86.3  3e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2212  HAD-superfamily hydrolase, subfamily IA, variant 3  34.55 
 
 
220 aa  85.9  4e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2412  HAD-superfamily hydrolase, subfamily IA, variant 3  32.8 
 
 
222 aa  84.7  9e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3074  HAD family hydrolase  27.32 
 
 
222 aa  83.2  0.000000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2075  HAD family hydrolase  30.65 
 
 
217 aa  83.2  0.000000000000003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  decreased coverage  0.00099021 
 
 
-
 
NC_011004  Rpal_4817  HAD-superfamily hydrolase, subfamily IA, variant 3  33.87 
 
 
235 aa  82.8  0.000000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.821962  n/a   
 
 
-
 
NC_007604  Synpcc7942_1351  HAD family hydrolase  29.95 
 
 
236 aa  80.9  0.00000000000001  Synechococcus elongatus PCC 7942  Bacteria  decreased coverage  0.00941248  normal 
 
 
-
 
NC_013159  Svir_39300  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  34.39 
 
 
218 aa  80.9  0.00000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007335  PMN2A_0056  HAD family hydrolase  33.88 
 
 
226 aa  80.9  0.00000000000002  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_22200  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  35.42 
 
 
217 aa  80.5  0.00000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.172111  normal 
 
 
-
 
NC_011899  Hore_10160  HAD-superfamily hydrolase, subfamily IA, variant 3  25.93 
 
 
217 aa  79.7  0.00000000000003  Halothermothrix orenii H 168  Bacteria  normal  0.64096  n/a   
 
 
-
 
NC_008786  Veis_2048  HAD family hydrolase  31.94 
 
 
238 aa  78.6  0.00000000000007  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.539587  normal  0.409572 
 
 
-
 
NC_008819  NATL1_06771  phosphatase/phosphohexomutase  32.79 
 
 
226 aa  78.6  0.00000000000007  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_2465  HAD family hydrolase  27.05 
 
 
220 aa  78.2  0.00000000000009  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3933  HAD family hydrolase  31.02 
 
 
271 aa  78.2  0.0000000000001  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0320  HAD family hydrolase  33.87 
 
 
241 aa  76.6  0.0000000000002  Caulobacter sp. K31  Bacteria  normal  0.288784  normal 
 
 
-
 
NC_009076  BURPS1106A_1066  haloacid dehalogenase, IA family protein  31.9 
 
 
224 aa  76.6  0.0000000000002  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1034  hydrolase  29.47 
 
 
217 aa  77  0.0000000000002  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1286  HAD family hydrolase  32.09 
 
 
229 aa  76.6  0.0000000000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1040  HAD family hydrolase  26.32 
 
 
226 aa  76.6  0.0000000000003  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00000171478  n/a   
 
 
-
 
NC_009636  Smed_2352  HAD family hydrolase  31.35 
 
 
222 aa  76.3  0.0000000000004  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00492029  normal 
 
 
-
 
NC_007912  Sde_3349  phosphatase/phosphohexomutase-like  32.35 
 
 
221 aa  75.9  0.0000000000004  Saccharophagus degradans 2-40  Bacteria  normal  0.0143367  normal  0.0340969 
 
 
-
 
NC_010084  Bmul_0864  HAD family hydrolase  30.92 
 
 
226 aa  76.3  0.0000000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2463  HAD family hydrolase  27.51 
 
 
209 aa  76.3  0.0000000000004  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA0717  HAD-superfamily hydrolase  31.9 
 
 
224 aa  75.9  0.0000000000005  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5006  HAD family hydrolase  30.8 
 
 
229 aa  75.5  0.0000000000005  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_1060  haloacid dehalogenase, IA family protein  31.9 
 
 
224 aa  75.9  0.0000000000005  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1609  HAD-superfamily hydrolase  31.9 
 
 
224 aa  75.9  0.0000000000005  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2296  HAD-superfamily hydrolase  31.9 
 
 
224 aa  75.9  0.0000000000005  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2990  HAD-superfamily hydrolase  31.9 
 
 
224 aa  75.9  0.0000000000005  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3054  HAD family hydrolase  31.05 
 
 
224 aa  75.5  0.0000000000006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.751068  normal  0.223571 
 
 
-
 
NC_013441  Gbro_2452  HAD-superfamily hydrolase, subfamily IA, variant 3  32.28 
 
 
232 aa  75.1  0.0000000000007  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2542  HAD family hydrolase  29.63 
 
 
214 aa  74.3  0.000000000001  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.214098 
 
 
-
 
NC_013235  Namu_2787  HAD-superfamily hydrolase, subfamily IA, variant 3  31.18 
 
 
230 aa  74.3  0.000000000001  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00137861  hitchhiker  0.0000132599 
 
 
-
 
NC_013093  Amir_7029  HAD-superfamily hydrolase, subfamily IA, variant 3  34.17 
 
 
213 aa  74.3  0.000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3473  HAD family hydrolase  30.37 
 
 
243 aa  74.7  0.000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0271  hypothetical protein  32.11 
 
 
229 aa  73.6  0.000000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  0.586518  normal 
 
 
-
 
NC_013205  Aaci_2469  HAD-superfamily hydrolase, subfamily IA, variant 3  31.05 
 
 
224 aa  73.2  0.000000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.618161  n/a   
 
 
-
 
NC_009664  Krad_1843  HAD-superfamily hydrolase, subfamily IA, variant 3  33.33 
 
 
241 aa  73.2  0.000000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.101722  normal 
 
 
-
 
NC_009952  Dshi_1676  HAD-like hydrolase  33.89 
 
 
219 aa  72.8  0.000000000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.653252  normal  0.340852 
 
 
-
 
NC_011059  Paes_0473  HAD-superfamily hydrolase, subfamily IA, variant 3  30.05 
 
 
211 aa  72.4  0.000000000005  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.0000148872  normal 
 
 
-
 
NC_013947  Snas_4498  HAD-superfamily hydrolase subfamily IA, variant 3  30.65 
 
 
223 aa  72  0.000000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.511661  normal  0.0143777 
 
 
-
 
NC_010002  Daci_5978  HAD family hydrolase  31.09 
 
 
230 aa  71.6  0.000000000008  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.367832 
 
 
-
 
NC_013530  Xcel_1481  HAD-superfamily hydrolase, subfamily IA, variant 3  33.68 
 
 
233 aa  71.6  0.000000000009  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2008  HAD-superfamily hydrolase, subfamily IA, variant 3  33.72 
 
 
213 aa  71.6  0.000000000009  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.296794  normal 
 
 
-
 
NC_011369  Rleg2_0846  HAD-superfamily hydrolase, subfamily IA, variant 3  25.27 
 
 
231 aa  71.2  0.00000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.814852 
 
 
-
 
NC_013159  Svir_32070  haloacid dehalogenase superfamily enzyme, subfamily IA  34.22 
 
 
227 aa  71.2  0.00000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.466176  normal  0.444114 
 
 
-
 
NC_009485  BBta_7216  putative haloacid dehalogenase-like hydrolase  30.89 
 
 
223 aa  71.2  0.00000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_1218  putative hydrolase  32.47 
 
 
762 aa  71.2  0.00000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3346  HAD family hydrolase  29.41 
 
 
221 aa  70.5  0.00000000002  Caulobacter sp. K31  Bacteria  normal  0.363754  normal 
 
 
-
 
NC_007519  Dde_2523  HAD family hydrolase  27.98 
 
 
219 aa  70.9  0.00000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.000000000119514  n/a   
 
 
-
 
NC_007958  RPD_0243  HAD family hydrolase  29.05 
 
 
217 aa  70.1  0.00000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3047  HAD-superfamily hydrolase, subfamily IA, variant 3  31.02 
 
 
226 aa  70.5  0.00000000002  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1893  HAD family hydrolase  29.47 
 
 
222 aa  70.1  0.00000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.675301 
 
 
-
 
NC_009441  Fjoh_0350  HAD family hydrolase  28.42 
 
 
208 aa  70.5  0.00000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.373549  n/a   
 
 
-
 
NC_014248  Aazo_4442  HAD superfamily hydrolase  25.59 
 
 
228 aa  70.1  0.00000000003  'Nostoc azollae' 0708  Bacteria  normal  0.536318  n/a   
 
 
-
 
NC_008146  Mmcs_3148  HAD family hydrolase  32.61 
 
 
228 aa  69.7  0.00000000003  Mycobacterium sp. MCS  Bacteria  normal  0.0274068  n/a   
 
 
-
 
NC_010508  Bcenmc03_2435  HAD family hydrolase  30.72 
 
 
227 aa  70.1  0.00000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.396573  normal  0.95205 
 
 
-
 
NC_009077  Mjls_3160  HAD family hydrolase  32.61 
 
 
228 aa  69.7  0.00000000003  Mycobacterium sp. JLS  Bacteria  normal  0.0720917  normal  0.533727 
 
 
-
 
NC_008705  Mkms_3210  HAD family hydrolase  32.61 
 
 
228 aa  69.7  0.00000000003  Mycobacterium sp. KMS  Bacteria  normal  0.742759  normal  0.278604 
 
 
-
 
NC_010001  Cphy_0822  HAD family hydrolase  27.72 
 
 
396 aa  68.9  0.00000000005  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4073  HAD-superfamily hydrolase subfamily IA, variant 3  31.35 
 
 
219 aa  68.9  0.00000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.358464  normal 
 
 
-
 
NC_011886  Achl_1913  HAD-superfamily hydrolase, subfamily IA, variant 3  29.32 
 
 
245 aa  68.9  0.00000000006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000014808 
 
 
-
 
NC_008609  Ppro_2888  HAD family hydrolase  30.11 
 
 
215 aa  68.9  0.00000000006  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_3073  HAD family hydrolase  28.65 
 
 
223 aa  68.6  0.00000000008  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00582956  n/a   
 
 
-
 
NC_009654  Mmwyl1_0641  HAD family hydrolase  25.96 
 
 
220 aa  68.6  0.00000000008  Marinomonas sp. MWYL1  Bacteria  normal  0.950078  normal  0.0427696 
 
 
-
 
NC_009012  Cthe_0780  HAD family hydrolase  33.03 
 
 
227 aa  68.2  0.00000000009  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2232  HAD family hydrolase  29.89 
 
 
233 aa  67.8  0.0000000001  Salinispora tropica CNB-440  Bacteria  normal  0.470588  normal 
 
 
-
 
NC_011071  Smal_0452  HAD-superfamily hydrolase, subfamily IA, variant 3  26.49 
 
 
227 aa  67.8  0.0000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_004116  SAG0181  HAD superfamily hydrolase  24.76 
 
 
214 aa  67.8  0.0000000001  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_25290  haloacid dehalogenase superfamily enzyme, subfamily IA  31.38 
 
 
244 aa  67.8  0.0000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0218735  n/a   
 
 
-
 
NC_004578  PSPTO_0708  HAD-superfamily hydrolase  28.33 
 
 
212 aa  67.4  0.0000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1197  HAD-superfamily hydrolase, subfamily IA, variant 3  28.93 
 
 
225 aa  67  0.0000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0955551  normal  0.148864 
 
 
-
 
NC_010682  Rpic_0122  HAD-superfamily hydrolase, subfamily IA, variant 3  29.63 
 
 
229 aa  67.4  0.0000000002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5021  HAD-superfamily hydrolase, subfamily IA, variant 3  26.32 
 
 
223 aa  67.4  0.0000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.886555  normal  0.11436 
 
 
-
 
NC_009707  JJD26997_1807  HAD superfamily hydrolase  26.18 
 
 
212 aa  66.6  0.0000000003  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2245  HAD-superfamily hydrolase, subfamily IA, variant 3  31.02 
 
 
247 aa  66.6  0.0000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.56873  normal 
 
 
-
 
NC_007005  Psyr_0614  HAD family hydrolase  28.72 
 
 
212 aa  66.6  0.0000000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.631998 
 
 
-
 
NC_007492  Pfl01_1752  HAD family hydrolase  27.04 
 
 
232 aa  66.6  0.0000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009369  OSTLU_7390  predicted protein  31.64 
 
 
176 aa  66.6  0.0000000003  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal  0.584892 
 
 
-
 
NC_007517  Gmet_0226  HAD family hydrolase  29.35 
 
 
218 aa  66.6  0.0000000003  Geobacter metallireducens GS-15  Bacteria  normal  unclonable  4.68138e-23 
 
 
-
 
NC_008060  Bcen_1819  HAD family hydrolase  30.12 
 
 
230 aa  66.6  0.0000000003  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2430  HAD family hydrolase  30.12 
 
 
230 aa  66.6  0.0000000003  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_2349  HAD family hydrolase  31.36 
 
 
215 aa  66.2  0.0000000003  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.355354 
 
 
-
 
NC_004578  PSPTO_5452  HAD-superfamily hydrolase  29.82 
 
 
212 aa  65.9  0.0000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7385  HAD-superfamily hydrolase, subfamily IA  31.9 
 
 
248 aa  66.2  0.0000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1729  HAD family hydrolase  28.57 
 
 
728 aa  65.9  0.0000000004  Methylobacillus flagellatus KT  Bacteria  normal  0.696153  hitchhiker  0.000289006 
 
 
-
 
NC_007510  Bcep18194_A5761  HAD family hydrolase  30.12 
 
 
230 aa  65.9  0.0000000005  Burkholderia sp. 383  Bacteria  normal  normal  0.434406 
 
 
-
 
NC_011729  PCC7424_4434  HAD-superfamily hydrolase, subfamily IA, variant 3  28.02 
 
 
217 aa  65.9  0.0000000005  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_012039  Cla_0304  HAD-superfamily hydrolase  28.65 
 
 
211 aa  65.9  0.0000000005  Campylobacter lari RM2100  Bacteria  normal  0.61412  n/a   
 
 
-
 
NC_012856  Rpic12D_0130  HAD-superfamily hydrolase, subfamily IA, variant 3  29.17 
 
 
232 aa  65.5  0.0000000006  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_4216  6-phosphogluconate phosphatase  27.68 
 
 
223 aa  65.5  0.0000000006  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_13910  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  30.32 
 
 
232 aa  65.5  0.0000000006  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.491881  normal 
 
 
-
 
NC_013457  VEA_001299  CbbY family protein  26.49 
 
 
216 aa  65.1  0.0000000007  Vibrio sp. Ex25  Bacteria  normal  0.916657  n/a   
 
 
-
 
NC_008312  Tery_0680  HAD family hydrolase  24.74 
 
 
227 aa  65.1  0.0000000007  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0123656 
 
 
-
 
NC_013061  Phep_1395  HAD-superfamily hydrolase, subfamily IA, variant 3  27.27 
 
 
201 aa  65.1  0.0000000009  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.0347939 
 
 
-
 
NC_014230  CA2559_05080  predicted phosphatase/phosphohexomutase  26.29 
 
 
227 aa  64.7  0.0000000009  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.071348  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>