Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0226 |
Symbol | |
ID | 3739437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 257812 |
End bp | 258468 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637777501 |
Product | HAD family hydrolase |
Protein accession | YP_383196 |
Protein GI | 78221449 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 4.68138e-23 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTTTGAGG GGATTTTCTG GGACAACGAC GGGGTGTTGA TGGAGACCGA GCACCTCTAC TATCAGGCCA ATGCCGAGGC GTTGGCCCAG GCGGGGGTGA CGCTTACCCT TGACGACTTT CGCCGGATCT CCCTGCGCCA GGGGGAGAGC GTGCTTGGCT TGGCCGCCGG CGCGGGGCTG GGTGACGAGG AGGCTACGGC GCTGCGCCGG GTGCGGGACG GGATCTATTA CCGGCTTCTG GGGGAGGAGG CCCGGGTGAT GTCCGGGGTG CGGGAAACCC TGGCGCGGCT CCACGGCCGG CTCCCCATGG CGATCGTCAC CAGCTGCCGC CGGGAGAACT TCCTGCAGAT GCACCGGCAG AGCGGACTCC TCGACTACTT CGATTTCATC CTCACCCGCG AGGACTACGG CGCGTCCAAG CCCGATCCCG AGCCATACCG GACCGCCTGC TCCCGGGTCG GGCTCGACCC CGGTCGCTGT CTGGCAATTG AGGATTCGGA GCGGGGTGTA ACCTCCGCCG CCCGGGCCGG GCTCGTCGTT GCCGCGATCC CCGGCGACAT GAACCGGGGG GGCGATTTCG GGGCCGCCCG CTGGCTTCTG GACGGCGTCC GCGAACTGCC GGCGCTTCTG AAGCTCGACG AGGCGCAAGG ATCGTAA
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Protein sequence | MFEGIFWDND GVLMETEHLY YQANAEALAQ AGVTLTLDDF RRISLRQGES VLGLAAGAGL GDEEATALRR VRDGIYYRLL GEEARVMSGV RETLARLHGR LPMAIVTSCR RENFLQMHRQ SGLLDYFDFI LTREDYGASK PDPEPYRTAC SRVGLDPGRC LAIEDSERGV TSAARAGLVV AAIPGDMNRG GDFGAARWLL DGVRELPALL KLDEAQGS
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