Gene Dd1591_4216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_4216 
Symbol 
ID8117666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp4760716 
End bp4761387 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content56% 
IMG OID644854593 
Product6-phosphogluconate phosphatase 
Protein accessionYP_003006488 
Protein GI251791767 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGAA TTGAATGCGT ATTTTTTGAC TGCGACGGCA CGCTGGTCGA CAGTGAAGTC 
ATCTGTTGCC AGGCCTATGT CAATATCTTT GTCCCCCACG GCGTCCACTT ACCGCTGGAT
GAAGTGATCA AAACCTTTAA GGGTATGAAG CTCTACGACA TTATCGACAG CATCAGTGAG
CGTTTCGGCC TGACGGTTTC AGTGGAGGAC ATGGAGCGTC ATTTCCGTCA GGAGGTGGCG
CGGCTTTTCG AACTCTCGCT ACAACCGATT CCCGGCGTGA AAGAAGTATT GGCGACGTTG
CAAGCGCCAG CAGCGGTGGT ATCCAACGGC CCGGTCAGCA AAATGCAGCA TTCGCTGGGG
TTGACCGGCC TGCTGTCATT CTTTGGCGAC CATCTGTACA GCGGCTACGA CATCGGCAAA
TGGAAGCCAG ACCCGGCGTT GATTCATCAC GCTGCACAGC AGATGGGGGT AGCGGTGGAA
AACTGTATTC TGGTGGAAGA TTCCGTCTCC GGCACGCAAG CCGGTATTGC CGCCGGCATA
CCGGTGTTCT ATTACTGCGC CGACGAGCAT AACGCCCCAA TCCATCACCC ATTAGTGACG
ATGTTTCACG ACATGGCGCA GTTGCCGGCG CTATGGCAGG CCCGTGGTTG GGCACTGACC
ACCGCCGACT GA
 
Protein sequence
MSRIECVFFD CDGTLVDSEV ICCQAYVNIF VPHGVHLPLD EVIKTFKGMK LYDIIDSISE 
RFGLTVSVED MERHFRQEVA RLFELSLQPI PGVKEVLATL QAPAAVVSNG PVSKMQHSLG
LTGLLSFFGD HLYSGYDIGK WKPDPALIHH AAQQMGVAVE NCILVEDSVS GTQAGIAAGI
PVFYYCADEH NAPIHHPLVT MFHDMAQLPA LWQARGWALT TAD