More than 300 homologs were found in PanDaTox collection
for query gene Dred_2808 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009253  Dred_2808  response regulator receiver/ANTAR domain-containing protein  100 
 
 
220 aa  445  1.0000000000000001e-124  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00041222  n/a   
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  50.79 
 
 
194 aa  207  7e-53  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_010424  Daud_2028  response regulator receiver/ANTAR domain-containing protein  50.8 
 
 
192 aa  199  1.9999999999999998e-50  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000049817  n/a   
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  48.68 
 
 
191 aa  186  2e-46  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  46.84 
 
 
208 aa  186  3e-46  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  47.62 
 
 
194 aa  178  4e-44  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  47.62 
 
 
194 aa  178  5.999999999999999e-44  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  44.44 
 
 
195 aa  172  3.9999999999999995e-42  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  44.21 
 
 
197 aa  169  3e-41  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_013216  Dtox_3764  response regulator receiver and ANTAR domain protein  42.31 
 
 
194 aa  159  4e-38  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0425638  normal 
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  44.39 
 
 
204 aa  158  7e-38  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  42.25 
 
 
199 aa  157  9e-38  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  41.71 
 
 
199 aa  157  1e-37  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_014210  Ndas_3159  response regulator receiver and ANTAR domain protein  43.41 
 
 
212 aa  157  1e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1181  response regulator receiver  41.41 
 
 
207 aa  157  2e-37  Thermobifida fusca YX  Bacteria  normal  0.928438  n/a   
 
 
-
 
NC_012669  Bcav_2208  response regulator receiver and ANTAR domain protein  40.89 
 
 
220 aa  155  4e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  42.31 
 
 
200 aa  152  2.9999999999999998e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2955  response regulator  42.31 
 
 
199 aa  150  1e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  39.46 
 
 
188 aa  150  1e-35  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_013131  Caci_5687  response regulator receiver and ANTAR domain protein  42.47 
 
 
210 aa  149  3e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  43.85 
 
 
197 aa  149  4e-35  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  43.96 
 
 
206 aa  149  4e-35  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  42.62 
 
 
200 aa  148  5e-35  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  40.66 
 
 
229 aa  146  2.0000000000000003e-34  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  41.21 
 
 
229 aa  146  3e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  40.66 
 
 
205 aa  145  4.0000000000000006e-34  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  42.78 
 
 
205 aa  145  5e-34  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  40.66 
 
 
213 aa  144  8.000000000000001e-34  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  40.53 
 
 
227 aa  144  9e-34  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_002939  GSU2822  response regulator  40.54 
 
 
191 aa  144  1e-33  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  43.96 
 
 
206 aa  144  1e-33  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  40.76 
 
 
229 aa  144  1e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  42.31 
 
 
201 aa  144  1e-33  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  40.66 
 
 
210 aa  144  1e-33  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  40.66 
 
 
210 aa  144  1e-33  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  42.31 
 
 
201 aa  144  1e-33  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  40.66 
 
 
210 aa  144  1e-33  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  40.11 
 
 
226 aa  143  2e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  40.66 
 
 
214 aa  143  2e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  41.07 
 
 
247 aa  143  2e-33  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  40.66 
 
 
220 aa  142  4e-33  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  41.21 
 
 
207 aa  141  6e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  39.56 
 
 
206 aa  141  7e-33  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  39.56 
 
 
194 aa  141  9e-33  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  39.13 
 
 
202 aa  140  1.9999999999999998e-32  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  42.07 
 
 
215 aa  138  4.999999999999999e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
NC_010320  Teth514_2177  response regulator receiver/ANTAR domain-containing protein  42.31 
 
 
190 aa  137  1e-31  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_11030  response regulator with putative antiterminator output domain  37.5 
 
 
198 aa  135  4e-31  Micrococcus luteus NCTC 2665  Bacteria  normal  0.241703  n/a   
 
 
-
 
NC_009253  Dred_2864  Fis family transcriptional regulator  39.15 
 
 
191 aa  134  9.999999999999999e-31  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000561884  n/a   
 
 
-
 
NC_008699  Noca_3018  response regulator receiver  40.11 
 
 
207 aa  132  3e-30  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2517  response regulator receiver and ANTAR domain protein  35.26 
 
 
194 aa  125  3e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_12950  response regulator with putative antiterminator output domain  33.52 
 
 
189 aa  124  2e-27  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.22629  normal  0.269406 
 
 
-
 
NC_008261  CPF_0888  response regulator  34.05 
 
 
191 aa  123  2e-27  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0297  response regulator receiver/ANTAR domain-containing protein  36.36 
 
 
195 aa  122  5e-27  Petrotoga mobilis SJ95  Bacteria  normal  0.719259  n/a   
 
 
-
 
NC_009253  Dred_2811  response regulator receiver/ANTAR domain-containing protein  37.36 
 
 
191 aa  121  8e-27  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00444481  n/a   
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  35.87 
 
 
198 aa  120  9.999999999999999e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_010816  BLD_0739  putative response regulator  34.91 
 
 
261 aa  120  1.9999999999999998e-26  Bifidobacterium longum DJO10A  Bacteria  hitchhiker  0.000540248  n/a   
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  32.98 
 
 
196 aa  120  1.9999999999999998e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  32.11 
 
 
198 aa  120  1.9999999999999998e-26  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_008609  Ppro_3459  response regulator receiver/ANTAR domain-containing protein  34.81 
 
 
205 aa  119  1.9999999999999998e-26  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0616  response regulator receiver domain protein  33.96 
 
 
249 aa  119  3e-26  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013517  Sterm_0084  response regulator receiver and ANTAR domain protein  33.69 
 
 
242 aa  118  4.9999999999999996e-26  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.682854  n/a   
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  35.26 
 
 
194 aa  116  3e-25  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_013385  Adeg_1890  response regulator receiver and ANTAR domain protein  37.43 
 
 
197 aa  116  3e-25  Ammonifex degensii KC4  Bacteria  normal  0.0366782  n/a   
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  31.38 
 
 
196 aa  115  3.9999999999999997e-25  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_1051  response regulator receiver and ANTAR domain protein  36.32 
 
 
192 aa  115  6e-25  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2091  response regulator  34.07 
 
 
187 aa  114  8.999999999999998e-25  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2031  response regulator receiver/ANTAR domain-containing protein  34.72 
 
 
198 aa  114  2.0000000000000002e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.00000000027462  n/a   
 
 
-
 
NC_009253  Dred_1289  response regulator receiver/ANTAR domain-containing protein  32.24 
 
 
221 aa  113  3e-24  Desulfotomaculum reducens MI-1  Bacteria  normal  0.132207  n/a   
 
 
-
 
NC_013124  Afer_1081  response regulator receiver and ANTAR domain protein  35.08 
 
 
203 aa  108  5e-23  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0963  response regulator receiver and ANTAR domain protein  32.98 
 
 
191 aa  107  1e-22  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000231614  normal 
 
 
-
 
NC_013235  Namu_0678  response regulator receiver and ANTAR domain protein  36.02 
 
 
243 aa  98.2  8e-20  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0569  response regulator receiver and ANTAR domain protein  34.88 
 
 
194 aa  97.1  2e-19  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000937079  n/a   
 
 
-
 
NC_013235  Namu_2394  response regulator receiver and ANTAR domain protein  30.77 
 
 
218 aa  97.1  2e-19  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00108275  hitchhiker  0.000509226 
 
 
-
 
NC_002977  MCA0588  response regulator NasT  32.39 
 
 
191 aa  87.8  1e-16  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  28.96 
 
 
195 aa  87.8  1e-16  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1293  response regulator receiver protein  32.85 
 
 
159 aa  82  0.000000000000006  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0970  response regulator receiver and ANTAR domain protein  33.52 
 
 
191 aa  79.3  0.00000000000004  Geobacter sp. M21  Bacteria  n/a    normal  0.772223 
 
 
-
 
NC_011146  Gbem_3279  response regulator receiver and ANTAR domain protein  32.58 
 
 
191 aa  78.6  0.00000000000007  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_23450  response regulator NasT  27.75 
 
 
192 aa  77.4  0.0000000000002  Azotobacter vinelandii DJ  Bacteria  normal  0.212044  n/a   
 
 
-
 
NC_009656  PSPA7_3519  hypothetical protein  27.75 
 
 
192 aa  76.3  0.0000000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2581  response regulator receiver/ANTAR domain-containing protein  27.75 
 
 
192 aa  75.9  0.0000000000005  Pseudomonas mendocina ymp  Bacteria  normal  0.298585  hitchhiker  0.00648362 
 
 
-
 
NC_011666  Msil_3768  response regulator receiver and ANTAR domain protein  26.09 
 
 
195 aa  75.5  0.0000000000006  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008463  PA14_41490  hypothetical protein  27.75 
 
 
192 aa  75.5  0.0000000000006  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  27.42 
 
 
207 aa  75.5  0.0000000000007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_009712  Mboo_1528  response regulator receiver protein  36.21 
 
 
450 aa  74.3  0.000000000001  Candidatus Methanoregula boonei 6A8  Archaea  hitchhiker  0.00374994  normal  0.77554 
 
 
-
 
NC_010172  Mext_4498  ANTAR domain-containing protein  27.27 
 
 
195 aa  73.9  0.000000000002  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  26.34 
 
 
196 aa  73.6  0.000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  26.88 
 
 
195 aa  73.9  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_011830  Dhaf_0995  response regulator receiver and ANTAR domain protein  27.6 
 
 
190 aa  73.9  0.000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000736079  n/a   
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  25.68 
 
 
196 aa  73.2  0.000000000003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_5014  response regulator receiver and ANTAR domain protein  26.78 
 
 
195 aa  72.8  0.000000000004  Methylobacterium populi BJ001  Bacteria  normal  normal  0.757534 
 
 
-
 
NC_007298  Daro_0829  response regulator receiver:ANTAR  33.09 
 
 
191 aa  72.4  0.000000000005  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.018256 
 
 
-
 
NC_011757  Mchl_4961  response regulator receiver and ANTAR domain protein  27.27 
 
 
195 aa  72.4  0.000000000005  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.044252 
 
 
-
 
NC_009712  Mboo_1488  response regulator receiver protein  35.9 
 
 
450 aa  72  0.000000000007  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.379239 
 
 
-
 
NC_010511  M446_3741  response regulator receiver/ANTAR domain-containing protein  30.56 
 
 
202 aa  70.9  0.00000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.755024  normal  0.109153 
 
 
-
 
NC_011894  Mnod_2871  response regulator receiver and ANTAR domain protein  29.73 
 
 
204 aa  70.5  0.00000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.372726  n/a   
 
 
-
 
NC_010322  PputGB1_1604  response regulator receiver/ANTAR domain-containing protein  26.18 
 
 
191 aa  69.7  0.00000000003  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0284464 
 
 
-
 
NC_004578  PSPTO_2306  response regulator NasT  26.34 
 
 
191 aa  70.1  0.00000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_5900  two component response regulator  26.32 
 
 
195 aa  70.1  0.00000000003  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
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