More than 300 homologs were found in PanDaTox collection
for query gene Dgeo_0098 on replicon NC_008025
Organism: Deinococcus geothermalis DSM 11300



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008025  Dgeo_0098  short-chain dehydrogenase/reductase SDR  100 
 
 
225 aa  449  1e-125  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_0675  short-chain dehydrogenase/reductase SDR  37.29 
 
 
232 aa  115  3.9999999999999997e-25  Meiothermus silvanus DSM 9946  Bacteria  normal  0.286686  normal  0.296802 
 
 
-
 
NC_013946  Mrub_2350  short-chain dehydrogenase/reductase SDR  39.66 
 
 
233 aa  111  1.0000000000000001e-23  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_002976  SERP2049  short chain dehydrogenase/reductase family oxidoreductase  28.88 
 
 
230 aa  97.1  2e-19  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_4341  short-chain dehydrogenase/reductase SDR  29.26 
 
 
236 aa  91.3  1e-17  Cyanothece sp. PCC 8802  Bacteria  normal  0.157663  normal 
 
 
-
 
NC_011726  PCC8801_4281  short-chain dehydrogenase/reductase SDR  29.26 
 
 
236 aa  91.3  1e-17  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009487  SaurJH9_2505  short-chain dehydrogenase/reductase SDR  26.52 
 
 
231 aa  87.8  1e-16  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2555  short-chain dehydrogenase/reductase SDR  26.52 
 
 
231 aa  87.8  1e-16  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.459049  n/a   
 
 
-
 
NC_010625  Bphy_7169  short chain dehydrogenase  32 
 
 
233 aa  85.5  6e-16  Burkholderia phymatum STM815  Bacteria  normal  normal  0.934383 
 
 
-
 
NC_008312  Tery_3927  short-chain dehydrogenase/reductase SDR  27.9 
 
 
235 aa  85.5  6e-16  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0764891  hitchhiker  0.00221105 
 
 
-
 
NC_012792  Vapar_6205  short chain dehydrogenase  33.88 
 
 
274 aa  85.1  9e-16  Variovorax paradoxus S110  Bacteria  normal  0.218013  n/a   
 
 
-
 
NC_007354  Ecaj_0374  3-oxoacyl-[acyl-carrier-protein] reductase  31.22 
 
 
244 aa  84  0.000000000000002  Ehrlichia canis str. Jake  Bacteria  normal  0.333975  n/a   
 
 
-
 
NC_007413  Ava_4667  Short-chain dehydrogenase/reductase SDR  29 
 
 
234 aa  83.6  0.000000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3104  short-chain dehydrogenase/reductase SDR  30.17 
 
 
252 aa  83.6  0.000000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1991  short-chain dehydrogenase/reductase SDR  29.13 
 
 
242 aa  84  0.000000000000002  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1116  short-chain dehydrogenase/reductase SDR  33.03 
 
 
234 aa  82  0.000000000000007  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2186  3-ketoacyl-(acyl-carrier-protein) reductase  29.73 
 
 
241 aa  81.6  0.000000000000008  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_0911  short chain dehydrogenase  30.3 
 
 
242 aa  81.3  0.00000000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009952  Dshi_0554  ribitol 2-dehydrogenase  28.45 
 
 
241 aa  80.9  0.00000000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0401  short-chain dehydrogenase/reductase SDR  28.14 
 
 
240 aa  81.3  0.00000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  0.256418  normal  0.85584 
 
 
-
 
NC_010803  Clim_2177  short-chain dehydrogenase/reductase SDR  30.96 
 
 
237 aa  80.9  0.00000000000002  Chlorobium limicola DSM 245  Bacteria  normal  0.874533  n/a   
 
 
-
 
NC_013730  Slin_2235  short-chain dehydrogenase/reductase SDR  35.14 
 
 
266 aa  80.5  0.00000000000002  Spirosoma linguale DSM 74  Bacteria  normal  0.30257  normal  0.665507 
 
 
-
 
NC_013161  Cyan8802_0938  short chain dehydrogenase  29.87 
 
 
242 aa  80.5  0.00000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_3107  short-chain alcohol-related dehydrogenase  30.11 
 
 
272 aa  79.7  0.00000000000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1567  short-chain dehydrogenase/reductase SDR  33.71 
 
 
284 aa  79.3  0.00000000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3217  short-chain dehydrogenase/reductase SDR  28.1 
 
 
253 aa  77.8  0.0000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2047  short-chain dehydrogenase/reductase SDR  32.86 
 
 
233 aa  78.2  0.0000000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0457321 
 
 
-
 
NC_010623  Bphy_3545  short chain dehydrogenase  28.05 
 
 
268 aa  77.8  0.0000000000001  Burkholderia phymatum STM815  Bacteria  normal  0.351676  normal 
 
 
-
 
NC_007413  Ava_2536  short chain dehydrogenase  27.27 
 
 
241 aa  77.4  0.0000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_0086  short-chain dehydrogenase/reductase SDR  31.05 
 
 
250 aa  77  0.0000000000002  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4590  short-chain dehydrogenase/reductase SDR  28.27 
 
 
242 aa  77.4  0.0000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_5218  short-chain dehydrogenase/reductase SDR  29.13 
 
 
236 aa  76.3  0.0000000000003  Cyanothece sp. PCC 7425  Bacteria  normal  0.901767  normal 
 
 
-
 
NC_009523  RoseRS_1073  thiamine pyrophosphate enzyme, central region  30.27 
 
 
847 aa  76.6  0.0000000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007335  PMN2A_1866  short chain dehydrogenase  26.07 
 
 
240 aa  76.3  0.0000000000003  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.0671437  n/a   
 
 
-
 
NC_012854  Rleg_6324  short-chain dehydrogenase/reductase SDR  28.09 
 
 
242 aa  76.3  0.0000000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.14693  normal 
 
 
-
 
NC_011773  BCAH820_4158  oxidoreductase, short-chain dehydrogenase/reductase family  29.47 
 
 
264 aa  76.6  0.0000000000003  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013132  Cpin_4702  short-chain dehydrogenase/reductase SDR  28.74 
 
 
272 aa  76.3  0.0000000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.315563  normal  0.0714958 
 
 
-
 
NC_008819  NATL1_05911  short chain dehydrogenase  25.64 
 
 
240 aa  75.9  0.0000000000004  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.884282  normal 
 
 
-
 
NC_014158  Tpau_4205  short-chain dehydrogenase/reductase SDR  31.58 
 
 
225 aa  75.9  0.0000000000005  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0292  short-chain dehydrogenase/reductase SDR  27.16 
 
 
241 aa  75.9  0.0000000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.324633  normal 
 
 
-
 
NC_011369  Rleg2_0263  short-chain dehydrogenase/reductase SDR  27.16 
 
 
241 aa  75.9  0.0000000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS4042  short chain dehydrogenase/reductase family oxidoreductase  29.47 
 
 
264 aa  75.5  0.0000000000006  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4357  short chain dehydrogenase/reductase family oxidoreductase  29.47 
 
 
264 aa  75.5  0.0000000000006  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_1376  NADP-dependent l-serine/l-allo-threonine dehydrogenase ydfg  25 
 
 
250 aa  75.5  0.0000000000006  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4268  oxidoreductase, short-chain dehydrogenase/reductase family  29.47 
 
 
264 aa  75.5  0.0000000000006  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5537  short-chain dehydrogenase/reductase SDR  27.32 
 
 
241 aa  75.5  0.0000000000006  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0494649 
 
 
-
 
NC_010498  EcSMS35_2581  short chain dehydrogenase  31.09 
 
 
263 aa  75.5  0.0000000000006  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0761  short-chain dehydrogenase/reductase SDR  29.44 
 
 
277 aa  75.1  0.0000000000007  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.416641 
 
 
-
 
NC_007633  MCAP_0250  short chain dehydrogenase/reductase family oxidoreductase  25.65 
 
 
240 aa  75.1  0.0000000000008  Mycoplasma capricolum subsp. capricolum ATCC 27343  Bacteria  normal  0.183431  n/a   
 
 
-
 
NC_012792  Vapar_5364  short chain dehydrogenase  31.58 
 
 
270 aa  75.1  0.0000000000009  Variovorax paradoxus S110  Bacteria  normal  0.778802  n/a   
 
 
-
 
NC_008599  CFF8240_0977  NADP-dependent l-serine/l-allo-threonine dehydrogenase ydfg  25.74 
 
 
248 aa  75.1  0.0000000000009  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.616956  n/a   
 
 
-
 
NC_011083  SeHA_C2705  short chain dehydrogenase  29.69 
 
 
263 aa  74.7  0.000000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.856225  normal 
 
 
-
 
NC_007948  Bpro_0167  short-chain dehydrogenase/reductase SDR  32.71 
 
 
234 aa  74.7  0.000000000001  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2590  short chain dehydrogenase  29.69 
 
 
263 aa  74.7  0.000000000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0942  short chain dehydrogenase  26.36 
 
 
268 aa  74.3  0.000000000001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_2815  short-chain dehydrogenase/reductase SDR  27.27 
 
 
242 aa  74.7  0.000000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3310  short-chain dehydrogenase/reductase SDR  32.79 
 
 
276 aa  74.7  0.000000000001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2811  short chain dehydrogenase  29.69 
 
 
263 aa  74.7  0.000000000001  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  29.47 
 
 
264 aa  74.7  0.000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_011080  SNSL254_A2639  short chain dehydrogenase  29.69 
 
 
263 aa  74.7  0.000000000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_0045  short-chain dehydrogenase/reductase SDR  30.73 
 
 
256 aa  74.7  0.000000000001  Psychromonas ingrahamii 37  Bacteria  normal  hitchhiker  0.00292404 
 
 
-
 
NC_011094  SeSA_A2681  short chain dehydrogenase  29.69 
 
 
263 aa  74.7  0.000000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_02326  short chain dehydrogenase  30.57 
 
 
263 aa  73.9  0.000000000002  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1235  short-chain dehydrogenase/reductase SDR  30.57 
 
 
263 aa  73.9  0.000000000002  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1418  short chain dehydrogenase/reductase family oxidoreductase  30.11 
 
 
248 aa  73.9  0.000000000002  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.0000653973  n/a   
 
 
-
 
NC_004311  BRA0268  ribitol dehydrogenase  28.14 
 
 
242 aa  73.9  0.000000000002  Brucella suis 1330  Bacteria  normal  0.245269  n/a   
 
 
-
 
NC_005957  BT9727_3881  oxidoreductase, short-chain dehydrogenase/reductase  28.95 
 
 
264 aa  73.9  0.000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1253  short chain dehydrogenase  30.57 
 
 
263 aa  73.9  0.000000000002  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.0560735 
 
 
-
 
NC_012892  B21_02287  hypothetical protein  30.57 
 
 
263 aa  73.9  0.000000000002  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_3656  short chain dehydrogenase  30.57 
 
 
263 aa  73.9  0.000000000002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  32.68 
 
 
262 aa  73.6  0.000000000002  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2188  thiamine pyrophosphate protein central region  29.73 
 
 
847 aa  73.6  0.000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.941679 
 
 
-
 
NC_009800  EcHS_A2562  short chain dehydrogenase  30.57 
 
 
263 aa  73.9  0.000000000002  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0964  short-chain dehydrogenase/reductase SDR  32.29 
 
 
227 aa  73.9  0.000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.0180181  normal  0.277757 
 
 
-
 
NC_013132  Cpin_4842  short-chain dehydrogenase/reductase SDR  30.64 
 
 
249 aa  73.6  0.000000000002  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.00384997  hitchhiker  0.000208801 
 
 
-
 
NC_010658  SbBS512_E2798  short chain dehydrogenase  30.57 
 
 
263 aa  73.9  0.000000000002  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2831  short-chain dehydrogenase/reductase SDR  28.95 
 
 
264 aa  73.9  0.000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4321  short-chain dehydrogenase/reductase SDR  27.27 
 
 
260 aa  73.6  0.000000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.488757  normal  0.0305569 
 
 
-
 
NC_009801  EcE24377A_2712  short chain dehydrogenase  30.57 
 
 
263 aa  73.9  0.000000000002  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_04715  Short-chain dehydrogenase/reductase SDR  27.66 
 
 
249 aa  73.6  0.000000000003  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.863639  n/a   
 
 
-
 
NC_013132  Cpin_2894  short-chain dehydrogenase/reductase SDR  27.32 
 
 
287 aa  73.2  0.000000000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3010  short-chain dehydrogenase/reductase SDR  33.88 
 
 
276 aa  73.2  0.000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.000215509 
 
 
-
 
NC_007777  Francci3_0348  short-chain dehydrogenase/reductase SDR  31.12 
 
 
280 aa  73.2  0.000000000003  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  29.19 
 
 
264 aa  73.2  0.000000000003  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_006274  BCZK3889  short chain dehydrogenase/reductase family oxidoreductase  28.95 
 
 
264 aa  72.8  0.000000000004  Bacillus cereus E33L  Bacteria  normal  0.674087  n/a   
 
 
-
 
NC_011059  Paes_2142  short-chain dehydrogenase/reductase SDR  30.1 
 
 
228 aa  72.8  0.000000000004  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.540844  normal  0.912393 
 
 
-
 
NC_007951  Bxe_A1732  putative short-chain dehydrogenase/reductase SDR  31.55 
 
 
257 aa  72.8  0.000000000004  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  28.64 
 
 
278 aa  72.8  0.000000000004  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_007413  Ava_1895  3-ketoacyl-(acyl-carrier-protein) reductase  29.95 
 
 
231 aa  72.4  0.000000000005  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.194823 
 
 
-
 
NC_013132  Cpin_0149  short-chain dehydrogenase/reductase SDR  31.14 
 
 
326 aa  72.4  0.000000000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1596  short chain dehydrogenase  28.63 
 
 
245 aa  72.4  0.000000000005  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.184756 
 
 
-
 
NC_009976  P9211_05381  short chain dehydrogenase  26.61 
 
 
235 aa  72.4  0.000000000005  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  33.17 
 
 
258 aa  72  0.000000000006  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_011365  Gdia_2812  short-chain dehydrogenase/reductase SDR  32.37 
 
 
249 aa  72.4  0.000000000006  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.184253  normal 
 
 
-
 
NC_003295  RSc3209  short chain dehydrogenase  26.67 
 
 
268 aa  72  0.000000000007  Ralstonia solanacearum GMI1000  Bacteria  normal  0.821388  normal  0.102605 
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  26.6 
 
 
257 aa  72  0.000000000007  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_3728  short-chain dehydrogenase/reductase SDR  27.12 
 
 
241 aa  72  0.000000000007  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2127  Serine 3-dehydrogenase  27.16 
 
 
255 aa  72  0.000000000007  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.247906  n/a   
 
 
-
 
NC_010725  Mpop_1331  short-chain dehydrogenase/reductase SDR  30 
 
 
332 aa  72  0.000000000007  Methylobacterium populi BJ001  Bacteria  normal  0.261589  normal  0.281891 
 
 
-
 
NC_008009  Acid345_2206  short-chain dehydrogenase/reductase SDR  29.66 
 
 
261 aa  71.6  0.000000000009  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0587036  normal  0.882414 
 
 
-
 
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