| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4321 |
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| Symbol | |
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| ID | 8360494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5379181 |
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| End bp | 5379963 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644966482 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003123970 |
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| Protein GI | 256423317 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.488757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0305569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCTAA AAAACAGTAG CGTCCTTATT ACCGGCGGAA CAAGCGGGAT CGGATTAGAA
CTTGTAAAAC AGCTGAGCAA AATAGGAACA ACGATCATTA TTACAGGCCG TAATCCGGAT
ACCTTGTATG CAACAAAAAA GCGCTTTCCA GCCATTCATA CTTTCCAAAG CGATGTGAGC
AAGGTAACAG ACATTGAACT GCTATATAAA GACGTCATCC GGGAGTTTCC TGCTTTGAAC
ATGATTATCA ATAACGCCGG AGAAATGCGA CTGATCGACC TACAGGATAC CGGGAAACGT
CTGGAAGACA TCACCCGGGA AATTGATATC AATCTTAGGG GAACAATCCA CATGGTACAC
CGGTTTTTAC CACATCTGCT TAAAAAGCCT GCTGCTGCGA TCGTCAACGT CTCCTCTGCG
ATTGCTTTTA TGCCCTATTC GGTAGCGCCT GTTTATAGTG CTTCTAAAGC AGCAGTCCAT
GCTTATACGA TGGCCTTACG CCTTCAGCTT GGTAAAACCA ATGTAAAAGT GATTGAATTG
ATCCCTCCGG GTGTAAGTAC GAATCTTCAA AACGACTGGG TACTGCAACC TAACCCAGGT
ATGATGATGG ATGTAGGCAA AATGGTAAAT GTCGCGATCA AAGGACTCCT AAAGGATACG
CCGGAAATCA AACCAATATT GGTTAAAGTA ATCAAAACGC TGAGTAAACT AATGCCCAAT
CAGCTGATGA AATTCGGACA CCGGGAATTT GAAAAATTCA AACAGCTTAA CAATCATCAA
TAA
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| Protein sequence | MDLKNSSVLI TGGTSGIGLE LVKQLSKIGT TIIITGRNPD TLYATKKRFP AIHTFQSDVS
KVTDIELLYK DVIREFPALN MIINNAGEMR LIDLQDTGKR LEDITREIDI NLRGTIHMVH
RFLPHLLKKP AAAIVNVSSA IAFMPYSVAP VYSASKAAVH AYTMALRLQL GKTNVKVIEL
IPPGVSTNLQ NDWVLQPNPG MMMDVGKMVN VAIKGLLKDT PEIKPILVKV IKTLSKLMPN
QLMKFGHREF EKFKQLNNHQ
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