Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_7169 |
Symbol | |
ID | 6248679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010625 |
Strand | - |
Start bp | 1821530 |
End bp | 1822231 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642598814 |
Product | short chain dehydrogenase |
Protein accession | YP_001863216 |
Protein GI | 186471898 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.934383 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGGT TGGACGGAAC GATCGTCGCG ATTACAGGCG CCTTTGGCAA TCTCGGTCTC GTGACGGCGC AAGCACTCGC GGAGCGCGGC GCGAAGGTCG CGTTGATCGG CCGAGGCAAG CCGCCGGCGC ATCTGCCCGC GTCGCTCGAT CACGCGTGTG TCGTGAGCGG CATCGATCTC GCGGAACGCG ACGCGGCGCA ACGCGCGGTG GATTCGATTG CCAGCCAGCT CGGCGGTCTG AATGCGCTCG TCAATGTTGC AGGCGCCTTC AGCTGGGAGT CGATCGCCGA CGGCAGCGCC GATACCTGGG AGCGCATGTT CGATGTGAAC GTGAAGACGA CGCTGAACGC GTCGAAGGCT GTGCTCTGGC ATCTGACGCG AACGGCGGGC GGACGGATCG TCAACGTCGG CGCGATGGCG GGCCTGAAGG CAGGCATGGG AATGGGCGCA TATGCCGCGT CGAAGGCGGG CGTGATGCGT CTCACGGAAG CACTCGCCGA AGAACTCAAG GACAAGGGCG CGACCGTCAA CGCGATCCTG CCCAGCATCA TCGACACGCC GCAGAATCGC GCGGACATGC CAGACGCCGA TTTCACGCGC TGGGTGACGC CGGAACAGAT TGCCGCCGTG ATCGCGTTCC TGTTGTCGAA AGAGGCGCAG TGCATGACGG GCGCGCTGAT TCCCGTTGCC GGCCGGGTAT GA
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Protein sequence | MNRLDGTIVA ITGAFGNLGL VTAQALAERG AKVALIGRGK PPAHLPASLD HACVVSGIDL AERDAAQRAV DSIASQLGGL NALVNVAGAF SWESIADGSA DTWERMFDVN VKTTLNASKA VLWHLTRTAG GRIVNVGAMA GLKAGMGMGA YAASKAGVMR LTEALAEELK DKGATVNAIL PSIIDTPQNR ADMPDADFTR WVTPEQIAAV IAFLLSKEAQ CMTGALIPVA GRV
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