Gene Bphy_7169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_7169 
Symbol 
ID6248679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1821530 
End bp1822231 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content65% 
IMG OID642598814 
Productshort chain dehydrogenase 
Protein accessionYP_001863216 
Protein GI186471898 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.934383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGGT TGGACGGAAC GATCGTCGCG ATTACAGGCG CCTTTGGCAA TCTCGGTCTC 
GTGACGGCGC AAGCACTCGC GGAGCGCGGC GCGAAGGTCG CGTTGATCGG CCGAGGCAAG
CCGCCGGCGC ATCTGCCCGC GTCGCTCGAT CACGCGTGTG TCGTGAGCGG CATCGATCTC
GCGGAACGCG ACGCGGCGCA ACGCGCGGTG GATTCGATTG CCAGCCAGCT CGGCGGTCTG
AATGCGCTCG TCAATGTTGC AGGCGCCTTC AGCTGGGAGT CGATCGCCGA CGGCAGCGCC
GATACCTGGG AGCGCATGTT CGATGTGAAC GTGAAGACGA CGCTGAACGC GTCGAAGGCT
GTGCTCTGGC ATCTGACGCG AACGGCGGGC GGACGGATCG TCAACGTCGG CGCGATGGCG
GGCCTGAAGG CAGGCATGGG AATGGGCGCA TATGCCGCGT CGAAGGCGGG CGTGATGCGT
CTCACGGAAG CACTCGCCGA AGAACTCAAG GACAAGGGCG CGACCGTCAA CGCGATCCTG
CCCAGCATCA TCGACACGCC GCAGAATCGC GCGGACATGC CAGACGCCGA TTTCACGCGC
TGGGTGACGC CGGAACAGAT TGCCGCCGTG ATCGCGTTCC TGTTGTCGAA AGAGGCGCAG
TGCATGACGG GCGCGCTGAT TCCCGTTGCC GGCCGGGTAT GA
 
Protein sequence
MNRLDGTIVA ITGAFGNLGL VTAQALAERG AKVALIGRGK PPAHLPASLD HACVVSGIDL 
AERDAAQRAV DSIASQLGGL NALVNVAGAF SWESIADGSA DTWERMFDVN VKTTLNASKA
VLWHLTRTAG GRIVNVGAMA GLKAGMGMGA YAASKAGVMR LTEALAEELK DKGATVNAIL
PSIIDTPQNR ADMPDADFTR WVTPEQIAAV IAFLLSKEAQ CMTGALIPVA GRV