| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2047 |
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| Symbol | |
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| ID | 6163493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2223367 |
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| End bp | 2224068 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641664816 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001791079 |
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| Protein GI | 171058730 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0457321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACT CGTCCACCGT GATGATCACC GGCGCGGCCG GCAACCTGGG CCGCGCGGTG
GCGCAAGCCT TTGCCGAGCG CGGCGCGCGG CTGGTGCTGG TCGACCTGCA ACCACAGAGC
CTGGCGCAGG CCTTCGGCGC GCCCGACGAG CGCCGGCTGC TCTGCCCCTG CAACCTGCTC
GACGCCGCGC AGGTGGACGC GGCGGTGCAG CGCGCCCTCG CGCAGTTCGG CCGCATCGAC
GTGCTGTGCA ACCTGGCCGG CGGCTTCGCG ATGGGCACGC CGGTGCACGA GACGGCCGAC
GCGCGTTTCG ACTTCCTGTT CGACCTCAAC GTGCGCACGC TGCTGCACAC CGCACGCGCC
GTGGTGCCGG GCATGATCGC GAGCGGCGGC GGCAAGATCG TCAACGTCGG CGCCTTCGGG
GCGCACAAAG GCGCCGCGCT GATGGGCGCC TACGGCGCGG CCAAGGCCAG CGTGGCGCGG
CTCACCGAGG CGATGTCGGC CGAGTTGCGC GAGCAGCGCA TCAACGTCAA CGCCGTGCTG
CCCACGATCA TCGACACCCC ACAAAACCGC GCCGCGATGC CCGACGCCGA CCCGGCCCGC
TGGGTGGCGC CGGCCGACCT GGCGCAGGTG ATCGTGTTCC TGGCGTCGGA CGCGGCGTGC
GCCGTGCATG GCGCGACGCT GCCGGTCACC GGGCTGAGCT GA
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| Protein sequence | MTHSSTVMIT GAAGNLGRAV AQAFAERGAR LVLVDLQPQS LAQAFGAPDE RRLLCPCNLL
DAAQVDAAVQ RALAQFGRID VLCNLAGGFA MGTPVHETAD ARFDFLFDLN VRTLLHTARA
VVPGMIASGG GKIVNVGAFG AHKGAALMGA YGAAKASVAR LTEAMSAELR EQRINVNAVL
PTIIDTPQNR AAMPDADPAR WVAPADLAQV IVFLASDAAC AVHGATLPVT GLS
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