Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_6324 |
Symbol | |
ID | 8016938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012854 |
Strand | + |
Start bp | 40940 |
End bp | 41668 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644828119 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002979319 |
Protein GI | 241554106 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.14693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACAGG ATCTGTCTGG AAAAGTCGCG GCCGTCACCG GAGCGGCGTC GGGTATCGGC CTGGAATGCG CCAAGGCTTT GCTTGCCGCC GGCGTTCGGG TGGTGCTGGT CGACCGTAAC GAGGAAGCGT TGCGGGAAAT CTGCTCGAAA CTCGACGCCA ACGCCATTCC CTTGGTCATC GATCTCACCG ATCCGAAAAG CGTCGAACGG ATGATGCCTG AGATACTGGA AAAAACCGGC CAACTGGATA TCTTCCACGC CAATGCCGGC TCTTATATCG GCGGCGAAGT GCTGGGCGGA GATCCTGATG CCTGGGACCG GATGCTCAAT CTGAACATCA ACGCCGCATT CCGTTCGGTG CATGCCGTCC TGCCGCATAT GGTCGAGCGC AAGACCGGGG ATATCATCCT GACGAGTTCC GTTGCCGGCA TGATCCCTGT CGTCTGGGAG CCGATCTACA CCGCCTCGAA ACACGCGGTC CAGGCATTCG TCCACACGCT GCGGCGGCAG GTAGCCAAGC ATGGCTTGCG CGTCGGCGCC GTCGCTCCAG GCCCCGTGGT CACGGCCCTT CTCAGCGATT GGCCGCAGGA GAAGTTGGAC GAGGCGCTCG CAGCCGGCGG CCTGATGGAG GCGAACGAAG TGGCCGAAGC CGTGCTCTTC ATGCTGACGC GCCCACGCAA CATTACGATC CGCGATCTCG TCATCCTGCC GCAGCGCGCC GACATCTGA
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Protein sequence | MGQDLSGKVA AVTGAASGIG LECAKALLAA GVRVVLVDRN EEALREICSK LDANAIPLVI DLTDPKSVER MMPEILEKTG QLDIFHANAG SYIGGEVLGG DPDAWDRMLN LNINAAFRSV HAVLPHMVER KTGDIILTSS VAGMIPVVWE PIYTASKHAV QAFVHTLRRQ VAKHGLRVGA VAPGPVVTAL LSDWPQEKLD EALAAGGLME ANEVAEAVLF MLTRPRNITI RDLVILPQRA DI
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