Gene Rleg_6324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6324 
Symbol 
ID8016938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand
Start bp40940 
End bp41668 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content62% 
IMG OID644828119 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002979319 
Protein GI241554106 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.14693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACAGG ATCTGTCTGG AAAAGTCGCG GCCGTCACCG GAGCGGCGTC GGGTATCGGC 
CTGGAATGCG CCAAGGCTTT GCTTGCCGCC GGCGTTCGGG TGGTGCTGGT CGACCGTAAC
GAGGAAGCGT TGCGGGAAAT CTGCTCGAAA CTCGACGCCA ACGCCATTCC CTTGGTCATC
GATCTCACCG ATCCGAAAAG CGTCGAACGG ATGATGCCTG AGATACTGGA AAAAACCGGC
CAACTGGATA TCTTCCACGC CAATGCCGGC TCTTATATCG GCGGCGAAGT GCTGGGCGGA
GATCCTGATG CCTGGGACCG GATGCTCAAT CTGAACATCA ACGCCGCATT CCGTTCGGTG
CATGCCGTCC TGCCGCATAT GGTCGAGCGC AAGACCGGGG ATATCATCCT GACGAGTTCC
GTTGCCGGCA TGATCCCTGT CGTCTGGGAG CCGATCTACA CCGCCTCGAA ACACGCGGTC
CAGGCATTCG TCCACACGCT GCGGCGGCAG GTAGCCAAGC ATGGCTTGCG CGTCGGCGCC
GTCGCTCCAG GCCCCGTGGT CACGGCCCTT CTCAGCGATT GGCCGCAGGA GAAGTTGGAC
GAGGCGCTCG CAGCCGGCGG CCTGATGGAG GCGAACGAAG TGGCCGAAGC CGTGCTCTTC
ATGCTGACGC GCCCACGCAA CATTACGATC CGCGATCTCG TCATCCTGCC GCAGCGCGCC
GACATCTGA
 
Protein sequence
MGQDLSGKVA AVTGAASGIG LECAKALLAA GVRVVLVDRN EEALREICSK LDANAIPLVI 
DLTDPKSVER MMPEILEKTG QLDIFHANAG SYIGGEVLGG DPDAWDRMLN LNINAAFRSV
HAVLPHMVER KTGDIILTSS VAGMIPVVWE PIYTASKHAV QAFVHTLRRQ VAKHGLRVGA
VAPGPVVTAL LSDWPQEKLD EALAAGGLME ANEVAEAVLF MLTRPRNITI RDLVILPQRA
DI