Gene Tpau_4205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4205 
Symbol 
ID9158393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp4334796 
End bp4335473 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content69% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003649112 
Protein GI296141869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC AACGACCCCT CGCCCTGATC ACCGGCGCCT CACGCGGGCT CGGTGCCCAG 
ATCGCCCGGC AGCTCGCGGA CACGCACGAC CTGCTGCTCG GCGGACGCCC CTCCCCCGGA 
CTCGATGCAC TCGCCGCGGA ACTCGGCGCT CTCACCTTCG CCGCCGACCT CACCGATCAC 
TCCACCGTTG CGGCTCTGGC ACAGTCGATT CCCCGCCTCG ACGTGCTGGT CCACAACGCC 
GGTATCGCAT CGATCGCGCG CATCGAGGAC ACCACCGCCA CCGACTGGCG CACCATGTTC 
GAGGTGAACC TGCTCGCAGT GGTCGAGCTG ACCAAGGCGC TCCTCCCCGC GCTACGAGAG 
GCGAACGGTC ATGTGGTGCT GATCAACTCG GGCGCAGGCA AGCGGGCGAA TCCCGGTTGG 
GGCGCCTACG CCGCAAGCAA GTTCGGGCTC ACCTCATTCG CCGAAGCGCT CCGCGCCGAG 
GAACCGGCAC TGCGCGTGAC GAGCGTGTTC CCCGGCCGCA TCGATACCCG GATGCAGGAG 
GGGATCTTCG CACTCGAAGG TCGCGACTAC TCCGCCGACA ACCTACTGCG GCCGGAGACG 
GTGGCCCGCG CGGTCGTGCA CGCGGTACAC ACCCCCGCCG ACGCGCATCC GACGGAGATC 
GTGCTCCGCC CACGCTGA
 
Protein sequence
MSEQRPLALI TGASRGLGAQ IARQLADTHD LLLGGRPSPG LDALAAELGA LTFAADLTDH 
STVAALAQSI PRLDVLVHNA GIASIARIED TTATDWRTMF EVNLLAVVEL TKALLPALRE 
ANGHVVLINS GAGKRANPGW GAYAASKFGL TSFAEALRAE EPALRVTSVF PGRIDTRMQE 
GIFALEGRDY SADNLLRPET VARAVVHAVH TPADAHPTEI VLRPR