Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_0938 |
Symbol | |
ID | 8390247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 958537 |
End bp | 959265 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644978954 |
Product | short chain dehydrogenase |
Protein accession | YP_003136707 |
Protein GI | 257058819 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTTT CTCAAAGTCA ACGACGAGCC ATTATTACAG GAGCCAGTAG TGGCATTGGA AAAGCAACAG CTTTAGCCTT TGCCAAAGCT GGAATCGATC TAGCCCTTGT CAGTCGTTCT GCCGACCAGC TAGAAGCCGT TGCTCAAGCG GCCAGAGAAG TTGGGGTGTT AGCCCAAACC TATGTGATTG ATTTGAGTCA GTTAGCGGAA ATCCCTACAA AAATCCAAGC AATTATCGAG GATTTCGGCC ACATTGACAT TATAGTTAAT AACGCAGGAA TGGGGTACAC GAATCTTCTA GGGGAAACCT CCCTATCCGA CTGGCAAAGG GTAATGGACT TGAACGTGAC CAGTATTTTT CAATGTGTTC GCGGGATTTT ACCCCAGATG CGCGATCGCG GGCAAGGAAC CATTATCAAT GTGTCTTCCA TTGCCGCCTT TAATACCTTT CCCCAATGGG GAGCCTATTC CGTCAGCAAA GCCGCCTTGG CAGCCTTTTC CAAAGTTCTC GCTGCCGAAG AACGGGCTCA TGGCATCCGC GTCATCACCA TTAGTCCAGG GTCGGTTAAT ACCTCCATTT GGGACACAGA GACCGTACAG GCCGATTTTG ATCGTTCAGC CATGCTCAGT CCTGATACCG TCGCTCAGAC AATTCTTCAC GCGGCCCTTT TACCAGCCGA GGCCGTGATT GAAGAAATGA CCATCTTATC CAGTGCTGGA ACCCTGTAA
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Protein sequence | MSFSQSQRRA IITGASSGIG KATALAFAKA GIDLALVSRS ADQLEAVAQA AREVGVLAQT YVIDLSQLAE IPTKIQAIIE DFGHIDIIVN NAGMGYTNLL GETSLSDWQR VMDLNVTSIF QCVRGILPQM RDRGQGTIIN VSSIAAFNTF PQWGAYSVSK AALAAFSKVL AAEERAHGIR VITISPGSVN TSIWDTETVQ ADFDRSAMLS PDTVAQTILH AALLPAEAVI EEMTILSSAG TL
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