| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1991 |
|---|
| Symbol | |
|---|
| ID | 5369237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 2257661 |
|---|
| End bp | 2258389 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640804337 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001340849 |
|---|
| Protein GI | 152996014 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAAA AACTTGAAGG TAAAGTCGCA GCAGTAACAG GTGCGGCATC TGGTATTGGT
CTCGCAACCG TTAAAGAAAT GATCGCTGCT GGTGCCCGAG TCGTATTGAT TGACCGTGAC
GAGGCGGCGC TTAAAAGAGC CTGTGCAGAG TTTGGAGATT CTGCAATACC TTTGGTGATT
GATCTGCTCG ACCCAGAAAG TTGCGCGAGT TTATTATCCG GTGTGCTAGA AAAAGCAGGG
CACCTAGATA TTCTTTATGC GAATGCGGGG AGCTACATTG GCGGCGACTT GATTGATGCT
GATCCTGCTG GCATTGATCG TATGTTAAAC CTGAACGTTA ATGCTGTGAT GAAAAATGTC
CAAGCTGTAT TGCCTCATAT GATTGAGCGC GGCACTGGCG ATATTGTAGT CACTGGATCT
GTCGCTGGGC ATTTTCCTGT GCCATGGGAG CCTATCTATG CGGCTTCTAA ATGGGCGATT
AATTGCTTCG TACAAACGAC GCGTCGCCAA GTAAAAGACT ATGGTATTCG TATGTCCTCG
GTTTCACCTG GCCCTGTGGC GAGTGCTTTG CTTGCTGATT GGCCAGAAGA GAATCTCCGC
AAAGCAAAAG AGAGTGGTAG CATTATCGAG CCTGAAGAAG TTGCTGATGC GGTTATGTAT
ATCTTAACTC GTCCACGAAA TGTGACGATT CGCGATATGA TTGTTTTGCC GTCCGCGTTT
GATATGTAA
|
|---|
| Protein sequence | MSQKLEGKVA AVTGAASGIG LATVKEMIAA GARVVLIDRD EAALKRACAE FGDSAIPLVI
DLLDPESCAS LLSGVLEKAG HLDILYANAG SYIGGDLIDA DPAGIDRMLN LNVNAVMKNV
QAVLPHMIER GTGDIVVTGS VAGHFPVPWE PIYAASKWAI NCFVQTTRRQ VKDYGIRMSS
VSPGPVASAL LADWPEENLR KAKESGSIIE PEEVADAVMY ILTRPRNVTI RDMIVLPSAF
DM
|
|---|
| |