| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1073 |
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| Symbol | |
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| ID | 5208019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1331846 |
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| End bp | 1334389 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640594687 |
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| Product | thiamine pyrophosphate enzyme, central region |
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| Protein accession | YP_001275432 |
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| Protein GI | 148655227 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
[COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGAA CAACCTATCC GCAGCGCACC TGGCTCATCA CCGGTTGCGC GACCGGCTTT
GGCGCCCGCC TGGCACAGCA AGTGATCGAT CGCGGGGAGC GCGTCGTCGC TACCGACCGC
GCTGTTGACG CGCTGGCGCA TCTGCACACC GACGATCCTG CGCGCTTGCT GCGTCTGGCG
ATGGATGTCA CCGACCCGGA TGCCGTCCGT CGCGCTGTTG AGATGGCGGT GGCGCGCTTC
GAGCGTATCG ATGTGCTGGT CAACAACGCT GGTCTCGGAC ACGGCGGACC GCTGGAGGAA
GCACGAGTGG ACGATATTCG CCGCCTCTTC GATGTGAATA TCATTGGTAT GATGATCGTG
ACGCAGGCGG TTCTTCCTCA TATGCGCGCA TCTGGTGGCG GGTATATTAT CAATATCTCG
TCGGACAGCG GCGTCGTGGG ATTTCCCTTC CAGGGCGTCT ACACCGCCAC CAAGCATGCC
GTCGAAGGTT TCTCCGACTG TCTCTATCAG GAAGTAACCC CCTTCGGCAT CCGTGTATCG
GTCATCCAGC CATGCGGCAT GTTCAAAACC GACATGCCCG CCAGTACGAT CACCGCTGCC
AGAGCCGCGA TCCGTCCTGA CAGCCCGTAC TATGCCCGTG CCACCCGCAT GGCGGACGCG
CTCGCCGCTG CCTGGGAGCA GAGCAGTGAT CCGCAGGACG TGGTCGATGC GATCATCGAG
GTTGCCGATG CCGATCCGCC GCCGCTGCGC CGCCGCGTCG GTCCGCCCGA CCGCACCGCG
CTGCCCGGTT TGCGTCAGCG GATGTCGCAC GAAGAGTTCG TCACATTCAT CTATCGTATG
ACCAGCGAAG ATGTCGCGCG ACCTGCCATG CCGCGCGGGC GCGTCGATGG CGGACGACTG
GTGGTACGCA CGCTGCGCGA AGCGGGGGTG ACGCATGCCT TCACCATCGT TGGCGGACAT
AACTACCAGC TGGTCAATGC CTGCCGCGAA GAGGGCATCC GTGTTATCGA CGTGCGCAAC
GAGATGCACG CCGCGCATAT GGCGGATGCC TTCGCTCGCT TTACCCGCCG ACCGGCGCTG
CTCACCGTCG ATGCCGCACC AGGTCTGGTC AACGCTATCG CCGGAATTGA AGTCGCATAT
GAGGCGCAGG TTCCGCTGAT TATTGCCTGT GCCCAGGGGT CGCTGGCAGG GCGCGACATC
GGTGTCATGC AGGCGATCGA TCAACTTCGA CTGTTGCGCC CGGTCACCAA ATGGCAGCGC
ACATGTTTCG ATGTGAAACG GTTGCCGGAA TACACCGCCG CTGCGTTGCG TCACGCAACA
ACGGGCCGCC CCGGTCCGAC GTTTCTCGAC TTTCCGCTGG AAGTGATGCA GGCGATGGTG
GACGAAGATG CCGTGACCTT TCCACGCAAC TATCGTGTGA CGACGGGACC AGCAGGAGAT
CCGGCACTGG TGCGCCGGGC GCTTGACCTG ATTCGACGCG CACGACGGCC GCTCCTGATC
GTCGGCAGCG GCGTCTGGTG GGCACACGGC GACGACGAAC TGCGTCGCTT CGTCGAGACA
ACCGGCATCC CTGTGCTCAG TCGCAACCTG GCGCGCGGCA TCATCCCCGA TGACCACCCG
CTTTCAGCCG GGTTCTATCC CACGCCAGCT GCGATGGCAG ACGCTTTCCT GGTGATCGGG
ACACGTCTCG ACTGGACGAT TGGATACGGG CGTTTTCCCC TCTTCAACCT GGACGCTCCC
GTCGTTCAGG TAGATATTCA CGCTGAAAGC ATCGGCAAAA CGCGACCGAT CGATGTTGGG
ATTATTGGTG ATGCGGCGCA GGTGCTGCGA CAACTCAACG ACCTCGTTGC GGCGGGCGGG
GAGTGGGCAA TGGAAGCGGC GTGGCCCCCC ATGGCACACG GGAGCATTGC CATGATGCGT
CAGGAAACTG CGGCTGCCGC AAACCTTCCA GCCCGCCCGT CCGACCGCCC CATGCATTCG
ATCCAGTTGA TGCAGGCGCT GGCAACATGC CTGCCGCGTG AGGCGATCAA AGTGGTGGAC
GGCGGTTACA GCGCGGCGTT TGCGATTCAG TATCTCGATG CCACCGTTCC TGGTGGGGTG
ACGTGGGTGG GCAGCACCGG ACATATCGGG GTGGGATTGG GTTTTGCCAT CGGCGCCAGA
CTGGCACATC CCGACAGCCC GGTGGTGGCG ATCATGGGTG ATGGCGCTTT TGGGCTATGT
GGACTGGAGT TCGATACTGC AGTGCGCCAC CAGCTGCCGA TTATCGTGGT GATCGCCAAC
GACGAAGGGT GGGGTGAGAC GCGCGATGGA CAACGGCGAC GGTGGGGCGA TGCGGCAGTG
ATCGGTACGC ATCTGGGACC ACGCCGTTAC GACGAACTGG CGCGGGCGCT CGGCGGCTAT
GGCGAACGTG TCGAACGACC GGAGGAGATT GCGCCCGCCA TTCGACGCGC CTTCGAGTCG
GGAGTGCCGG CGATCATCGA TGTGCATACC GATCCGGAAC AGCGCAGCAC GGCAGTCGCC
GGATTGCCCT GGATCGTTGA GTGA
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| Protein sequence | MNRTTYPQRT WLITGCATGF GARLAQQVID RGERVVATDR AVDALAHLHT DDPARLLRLA
MDVTDPDAVR RAVEMAVARF ERIDVLVNNA GLGHGGPLEE ARVDDIRRLF DVNIIGMMIV
TQAVLPHMRA SGGGYIINIS SDSGVVGFPF QGVYTATKHA VEGFSDCLYQ EVTPFGIRVS
VIQPCGMFKT DMPASTITAA RAAIRPDSPY YARATRMADA LAAAWEQSSD PQDVVDAIIE
VADADPPPLR RRVGPPDRTA LPGLRQRMSH EEFVTFIYRM TSEDVARPAM PRGRVDGGRL
VVRTLREAGV THAFTIVGGH NYQLVNACRE EGIRVIDVRN EMHAAHMADA FARFTRRPAL
LTVDAAPGLV NAIAGIEVAY EAQVPLIIAC AQGSLAGRDI GVMQAIDQLR LLRPVTKWQR
TCFDVKRLPE YTAAALRHAT TGRPGPTFLD FPLEVMQAMV DEDAVTFPRN YRVTTGPAGD
PALVRRALDL IRRARRPLLI VGSGVWWAHG DDELRRFVET TGIPVLSRNL ARGIIPDDHP
LSAGFYPTPA AMADAFLVIG TRLDWTIGYG RFPLFNLDAP VVQVDIHAES IGKTRPIDVG
IIGDAAQVLR QLNDLVAAGG EWAMEAAWPP MAHGSIAMMR QETAAAANLP ARPSDRPMHS
IQLMQALATC LPREAIKVVD GGYSAAFAIQ YLDATVPGGV TWVGSTGHIG VGLGFAIGAR
LAHPDSPVVA IMGDGAFGLC GLEFDTAVRH QLPIIVVIAN DEGWGETRDG QRRRWGDAAV
IGTHLGPRRY DELARALGGY GERVERPEEI APAIRRAFES GVPAIIDVHT DPEQRSTAVA
GLPWIVE
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