Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_2142 |
Symbol | |
ID | 6458442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 2319580 |
End bp | 2320266 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642726120 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002016793 |
Protein GI | 194334933 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.540844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.912393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAGCA AAAAAGTAGC ATTGATCACG GGAGCTGCCG GGGCTCTTGG CAGCGCGACC GCTGCAACAT TCAAAAAAGC CGGTTATCGA CTCTCTCTTC TTGACATGAA TATCAAGCCA CTTCAGGAAC GGTGGGAAGG CAAAGAGCAT GTCACCTGCT TACCATGCGA CCTGACCGAT GCCGGCAACA TTGAGGATGC CGTCGATAAG ACGGTCCGTA TGTACGGGTC GATCGACACC CTCCTCACAA TCGCAGGCGG TTTTGCTATG GGACCGCAAA TACATGAACT GACCGAGGAA AAGTGGGATT CAATGCAGAA CATGAATCTC AGAACAGTCT TTCTCGCCGC ACGGGCGGTA CTCCCGCACA TGCGCAAGCA ACAAAGCGGA AGTATCGTTA CCATCGGGGC ACAAACAGCT CTCCATGGCG CAGCGAATCT GGCCCCTTAC GTTGTCTCCA AATCGTCAGT CATACGGCTG ACTGAATGCA TGGCCCAAGA AAACCAAAAG AAAGGCATCC GCGTCAATTG CATTCTTCCC TCGGTCATCG ATACCCCCGC AAACAGAGCC GATATGCCTG ATGCCGATTT CTCGAAATGG ACCAAACCTG AGGCAATTGC CGACGTACTT CTTTTTCTCG CATCAGACGC ATCCAAAGCT GTTAACGGAG CATCGATACC CGTCTGA
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Protein sequence | MQSKKVALIT GAAGALGSAT AATFKKAGYR LSLLDMNIKP LQERWEGKEH VTCLPCDLTD AGNIEDAVDK TVRMYGSIDT LLTIAGGFAM GPQIHELTEE KWDSMQNMNL RTVFLAARAV LPHMRKQQSG SIVTIGAQTA LHGAANLAPY VVSKSSVIRL TECMAQENQK KGIRVNCILP SVIDTPANRA DMPDADFSKW TKPEAIADVL LFLASDASKA VNGASIPV
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