| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCV52592_1418 |
|---|
| Symbol | |
|---|
| ID | 5407233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter curvus 525.92 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009715 |
|---|
| Strand | + |
|---|
| Start bp | 847602 |
|---|
| End bp | 848348 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640872307 |
|---|
| Product | short chain dehydrogenase/reductase family oxidoreductase |
|---|
| Protein accession | YP_001408130 |
|---|
| Protein GI | 154174196 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000653973 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAA CGGCTTTTAT CACCGGTGCG ACATCGGGAT TTGGAGATGC GATCGCCAGG
AGACTTTCAC TGGATGGCTA CAAGATCATC GCGCTTGGTA GGCGCAAAGA AAGACTGGAA
AAACTAGCCG GTGAGCTTGG AAATACGCAT ATAATAGCCG CTGACATCAG AGATAAAAAG
GCCGTTTTTG ATGCAGTCAA AAATTTGCCT GAAAATTTCA AAGATATCGA GGTCTTGGTA
AATAACGCAG GACTCGCCCT CGGTCAGGAA AAAACGATAG ACGCGAGCAT CGAGGACTTT
GAGACGATGG TAGATACGAA CATCAAAGGG CTTTTATACT CGACAAAGGC CGTCTTGCCG
ATAATGACGC AACGAAAAAG CGGGTATATC TTTAACCTAG GCTCTGTCGC AGGCCACTGG
CCGTATCCTG GCGGCAACGT CTATGGCGGC ACGAAAGCCT TCGTAAAGCA GTTTAGCTAC
AACCTGCGAA ACGATCTGCT AGGCACAGGC ATACGCGTGA CCGAGATAGC TCCGGGCCTT
TGCAAGACCG AATTTAGCGA GGTTCGCTTT AAGGGAGACA AGGCCAAGGC CGACTCCATC
TACGCAAATA CGCAGTTCAT CACAGCCGAT GATATCGCGA CTATGGTACT AAACTGCTTA
AATCTGCCAA AGAGCGTGAA CGTAAATTTG CTCGAAGTCA TGGCGACGAC GCAGACTTGG
GCGGGATTTT ATTTTGAAAG AGATTGA
|
|---|
| Protein sequence | MKGTAFITGA TSGFGDAIAR RLSLDGYKII ALGRRKERLE KLAGELGNTH IIAADIRDKK
AVFDAVKNLP ENFKDIEVLV NNAGLALGQE KTIDASIEDF ETMVDTNIKG LLYSTKAVLP
IMTQRKSGYI FNLGSVAGHW PYPGGNVYGG TKAFVKQFSY NLRNDLLGTG IRVTEIAPGL
CKTEFSEVRF KGDKAKADSI YANTQFITAD DIATMVLNCL NLPKSVNVNL LEVMATTQTW
AGFYFERD
|
|---|
| |