| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0554 |
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| Symbol | rbtD |
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| ID | 5712007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 541133 |
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| End bp | 541858 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641266456 |
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| Product | ribitol 2-dehydrogenase |
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| Protein accession | YP_001531901 |
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| Protein GI | 159043107 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGATT TGTCTGGAAA GGTCGTGGCA ATCACGGGGG GCGCCTCGGG GATCGGTTTG
GCTTGCGCGC GTGCGTGCAT CGACGCGGGG GCCAAGGTTG CCATCATAGA TCGAAACGCA
ACGGCTTTGG AAGAGGTCCG CGCCGAGCTC GGCGCGCAGG CCGTTCCGAT CGTGACGGAC
CTGATGGACA AGGCGAGCGT GGCGCAGATG TTGTCCCGAA TTCTGGACAA AGCCGGACGG
TTGGACGCTT TCCATGCCAA CGCGGGCGCC TATGTCGGTG GCGATGTCCT CGCAGGGGAT
CCCGACGAAT GGGATCATGT GCTGAACCTC AACATCAATG CCGCGTTCCG ATCTGTGCAT
GCGGTCTTGC CGCACCTGGC GAAGCAGGGC TCGGGCGACG TCATCCTGAC GAGTTCGGTC
GCAGGCGTCA TCCCCGTAGT GTGGGAGCCG ATTTACACCG CCTCCAAACA TGCCGTGCAA
GCCTTCACCC ACAGCGTCCG GCGGCAGATG TCCAAACACG GTGTGCGCGT CGGCGCGATA
CTGCCCGGAC CGGTCGTGAC GGCCTTGTTG GATGACTGGC CCAAGCCCAA GATGGAACAG
GCCTTGGCCG AAGGCAGCCT CATGCAACCC AAGGACGTTG CCGACTGCGT CGTTTTCATG
CTTACGCGGC CTTCCAACGT GACGATCCGC GACCTCGTCC TTTTGCCAAA CGCGGTGGAC
TTGTGA
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| Protein sequence | MTDLSGKVVA ITGGASGIGL ACARACIDAG AKVAIIDRNA TALEEVRAEL GAQAVPIVTD
LMDKASVAQM LSRILDKAGR LDAFHANAGA YVGGDVLAGD PDEWDHVLNL NINAAFRSVH
AVLPHLAKQG SGDVILTSSV AGVIPVVWEP IYTASKHAVQ AFTHSVRRQM SKHGVRVGAI
LPGPVVTALL DDWPKPKMEQ ALAEGSLMQP KDVADCVVFM LTRPSNVTIR DLVLLPNAVD
L
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