Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_0401 |
Symbol | |
ID | 7286308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 200634 |
End bp | 201356 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643583407 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002481154 |
Protein GI | 220905843 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.256418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.85584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCTT CTGCCCCAGC CTATACCCTG ATCACCGGAG CCAGTAGCGG TATTGGTCGG GCCACGGCCT TAACCTGTGC CCAGGCTGGT TTGCCCCTGA TTCTCCTAGC CCGTTCTGTT GCCAAACTAG AAGCTGTAGC AACTGCTGCT CGTGCTTATG GGGTGGAGGT TGAAATTTGT CCGTTCGATC TGAGCCAGGT AGACCAGGTC GGCCCCCAAC TGAGTGAGAT TGTCAGTAAA TTTACGATCG AGACCCTGAT CAATGCCGCT GGAGCCGGAT ATACCGCCGA GATTCTGCAT ACCCCCCTGC AGGACTGGCA AAATCTACTC AATCTCAATC TCACCAGTGT GTTTCAGTGT ATTCAGGCCG TTTTACCGCA AATGCGTTCC CGCCATCAGG GTACGATTGT GAATGTGGTG TCCATTGCTG GTCGGCAGGT TTTTCCTCAG TGGGGAGCCT ACTGTGTGAG TAAATTTGGG CTGATGGCTC TCTCTAAAAC CCTGGCAGAG GAAGAACGCC CCTATGGAAT TCGGGTGATC AGTCTGTGCC CCGGTGCAGT GAATACGTCC CTTTGGGATG CGGGAACCGT CCAGGCAGAC TTCGATCGCA CGGCAATGCT CACCCCGGAA ATTGTGGCTG AAACCATTCT GCACGCCATC CAGTTACCTC CCCAGGCGGT GGTGGAAGAG CTGGTGCTCA TGCCCGGTGC CGGTACGTTT TAG
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Protein sequence | MNSSAPAYTL ITGASSGIGR ATALTCAQAG LPLILLARSV AKLEAVATAA RAYGVEVEIC PFDLSQVDQV GPQLSEIVSK FTIETLINAA GAGYTAEILH TPLQDWQNLL NLNLTSVFQC IQAVLPQMRS RHQGTIVNVV SIAGRQVFPQ WGAYCVSKFG LMALSKTLAE EERPYGIRVI SLCPGAVNTS LWDAGTVQAD FDRTAMLTPE IVAETILHAI QLPPQAVVEE LVLMPGAGTF
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