| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5537 |
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| Symbol | |
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| ID | 5319839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 501470 |
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| End bp | 502195 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640777288 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001314220 |
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| Protein GI | 150377625 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0494649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTTC ATAAAACGGT TGTGATTACC GGTGCATCGC AGGGCATCGG CGCCGGGCTC
GTGAAGACGT TCCTGGACAA AGGCTGGAGC GTCGTCGCGA CGTCCCGGCG GATCAGCGAG
GCGACATCGT TCGATCGTGC GGGAAGGCTT GAGCTTATTG ATGGCGACAT TGGCGATCCC
AAGACGGCGG AGCGCGTCTC TCAGGTAGCT GTCGAACAGT TCGGCTCCAT CGACGCCCTC
GTGAACAATG CAGGCGTCTT CTTCACCAAG CCGTTTCTCG AGTACACGAT CGAGGACTTC
CGGCGCCTCT CGGCGACCAA TCTCGAAGGC TTCGTCCACT TCACGAAACA CGCTGTCAGA
CAGATGCTTC GGCAGAGATC CGGTGGAAGC GTCGTCACGA TTACGTCGTC GCTGACCGAC
CATCCGATCG CTGGCGTCAA GGCATCCCTG CCGATGATCA CCAAGGGCGG GCTGAATGCG
ATCACCAAGA GCCTGGCGCT GGAGTTCGCC AGCGACAACA TCCGAGTAAA CGCGGTTTCG
CCTGGTGTTG TTGACACACC GCTCCATGCT ACGGGTTCAC GGGACTATCT TCGATCCTTG
TCGCCGATGG GCACCATCAC GGCGGTGCAG GAAATCGTGG ACGGCGTGAT CTATCTCACG
GAAGCGTCCA ATATCACTGG GGAGGTGCTG CACGTCGACA ACGGCGCACA TCTCGGCAAA
TGGTAA
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| Protein sequence | MSVHKTVVIT GASQGIGAGL VKTFLDKGWS VVATSRRISE ATSFDRAGRL ELIDGDIGDP
KTAERVSQVA VEQFGSIDAL VNNAGVFFTK PFLEYTIEDF RRLSATNLEG FVHFTKHAVR
QMLRQRSGGS VVTITSSLTD HPIAGVKASL PMITKGGLNA ITKSLALEFA SDNIRVNAVS
PGVVDTPLHA TGSRDYLRSL SPMGTITAVQ EIVDGVIYLT EASNITGEVL HVDNGAHLGK
W
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