Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_4842 |
Symbol | |
ID | 8361018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6049018 |
End bp | 6049767 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644966992 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003124477 |
Protein GI | 256423824 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00384997 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000208801 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATACGA CAAAGAAACT GGCAATCGTT ACCGGCGGTG GTTCCGGCAT CGGATTCGCC ATAGCAACAC AGTTTGTTCA GCATAATATT TATACGGTCA TCGTAGGCCG GGATGAACAG AAATTGCGGA ATGCCTGCGA ACAGCTTGGT CCCGGCAGTG AATGTTATAC CTGCGATTTG AGTGATCTGA ATGCTATTCC TGTCATGGTT GACATGATCA TCAGCAGGTA TGGTCATATA GATATCCTAG TCAACAATGC CGGCATCAAT ATGAAGAAAT CGTTTACGGA AGTGACGGAC GAAGAGTTTC AGGATATTCT GCAGACGAAC GTGACCGCTG TTTTTGCTTT ATCCCGTGAG GTAGTAAAAC ATCAGCTGGA AAAGAAGATA AGCGGTTGCC TCATTAACAT CAGCTCTATG GCTTCGCAAT ATGGTATTCC GAAAGTAATC GCTTACACTG CATCAAAATC GGCGATAGAG GGTATGACGA AAGCGATGGC GACGGAATTG TCACCTTATG GTATCCGGAT TAATTGTATA GCGCCGGGGT TTATTGCTAC GGATATGAGT GCGAAGGCGC TGGAATCAGA TCCTGAAAGG AAAGCGAAGG CTTTGGGCAG AACGCCGCTG GGGTATCTGG GGCGGCCGGC AGATATTGGC GCGGCCGCAT TATTCCTGGC TTCGGATGCT GCGCAATATA TCACAGGGGT GGTGTTGCCG GTAGATGGCG GGAATGCCAT CGGATTCTGA
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Protein sequence | MNTTKKLAIV TGGGSGIGFA IATQFVQHNI YTVIVGRDEQ KLRNACEQLG PGSECYTCDL SDLNAIPVMV DMIISRYGHI DILVNNAGIN MKKSFTEVTD EEFQDILQTN VTAVFALSRE VVKHQLEKKI SGCLINISSM ASQYGIPKVI AYTASKSAIE GMTKAMATEL SPYGIRINCI APGFIATDMS AKALESDPER KAKALGRTPL GYLGRPADIG AAALFLASDA AQYITGVVLP VDGGNAIGF
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