More than 300 homologs were found in PanDaTox collection
for query gene Dbac_1807 on replicon NC_013173
Organism: Desulfomicrobium baculatum DSM 4028



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013173  Dbac_1807  response regulator receiver protein  100 
 
 
139 aa  285  1e-76  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  58.59 
 
 
151 aa  163  9e-40  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  53.12 
 
 
157 aa  141  3e-33  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  54.4 
 
 
139 aa  139  9e-33  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  53.66 
 
 
147 aa  136  7.999999999999999e-32  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  55.28 
 
 
153 aa  135  2e-31  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  57.63 
 
 
144 aa  135  2e-31  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  55 
 
 
129 aa  131  3.9999999999999996e-30  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  54.39 
 
 
131 aa  125  2.0000000000000002e-28  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  50.43 
 
 
121 aa  125  2.0000000000000002e-28  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  55.08 
 
 
128 aa  124  3e-28  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  54.46 
 
 
403 aa  124  4.0000000000000003e-28  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  51.72 
 
 
119 aa  124  5e-28  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  49.61 
 
 
141 aa  124  6e-28  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  46.77 
 
 
135 aa  120  4e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  52.94 
 
 
147 aa  120  6e-27  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  44.07 
 
 
120 aa  118  3e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  48.72 
 
 
147 aa  117  3.9999999999999996e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  45.6 
 
 
142 aa  116  7.999999999999999e-26  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  47.11 
 
 
126 aa  116  9.999999999999999e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  49.15 
 
 
122 aa  115  9.999999999999999e-26  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  47.2 
 
 
413 aa  114  5e-25  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  43.31 
 
 
135 aa  111  3e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0150  response regulator receiver protein  53.28 
 
 
134 aa  111  3e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal  0.680282 
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  46.61 
 
 
130 aa  110  4.0000000000000004e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  46.34 
 
 
143 aa  110  5e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  47.11 
 
 
144 aa  110  5e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  43.08 
 
 
142 aa  109  1.0000000000000001e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  45.97 
 
 
151 aa  109  1.0000000000000001e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  44.26 
 
 
157 aa  107  5e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  40.3 
 
 
159 aa  106  1e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  43.51 
 
 
127 aa  105  3e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  47.01 
 
 
408 aa  105  3e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  48.28 
 
 
411 aa  104  5e-22  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  47.01 
 
 
374 aa  104  5e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  46.09 
 
 
129 aa  103  7e-22  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  48.31 
 
 
143 aa  102  1e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_008751  Dvul_0404  response regulator receiver protein  42.62 
 
 
151 aa  102  1e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.134088 
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  44.07 
 
 
129 aa  102  2e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  39.69 
 
 
142 aa  102  2e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  44.54 
 
 
141 aa  102  2e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_009943  Dole_1348  response regulator receiver protein  40.74 
 
 
173 aa  102  2e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  37.5 
 
 
494 aa  101  4e-21  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  48.11 
 
 
465 aa  100  8e-21  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_007298  Daro_1804  two component, sigma54 specific, Fis family transcriptional regulator  40.15 
 
 
469 aa  100  9e-21  Dechloromonas aromatica RCB  Bacteria  normal  0.0358984  normal  0.379225 
 
 
-
 
NC_013223  Dret_0200  two component, sigma54 specific, transcriptional regulator, Fis family  37.1 
 
 
449 aa  99.4  1e-20  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2346  response regulator receiver protein  42.62 
 
 
136 aa  99.8  1e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_2822  response regulator receiver protein  43.1 
 
 
135 aa  99.8  1e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  37.31 
 
 
455 aa  98.6  2e-20  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_009483  Gura_0009  multi-sensor signal transduction histidine kinase  42.5 
 
 
508 aa  99.4  2e-20  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0633  response regulator receiver protein  40.32 
 
 
133 aa  99  2e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.546392  normal 
 
 
-
 
NC_008751  Dvul_2709  response regulator receiver sensor signal transduction histidine kinase  43.7 
 
 
501 aa  98.6  2e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  0.710197  normal  0.745824 
 
 
-
 
NC_011146  Gbem_3819  two component, sigma54 specific, transcriptional regulator, Fis family  41.88 
 
 
455 aa  98.2  4e-20  Geobacter bemidjiensis Bem  Bacteria  normal  0.785821  n/a   
 
 
-
 
NC_009831  Ssed_2940  two component, sigma54 specific, Fis family transcriptional regulator  38.02 
 
 
500 aa  97.8  4e-20  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0010  PAS/PAC sensor hybrid histidine kinase  41.53 
 
 
508 aa  97.4  5e-20  Geobacter metallireducens GS-15  Bacteria  normal  0.0502065  normal 
 
 
-
 
NC_007908  Rfer_2737  response regulator receiver domain-containing protein  41.12 
 
 
139 aa  97.4  5e-20  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.00154696  n/a   
 
 
-
 
NC_012918  GM21_3903  two component, sigma54 specific, transcriptional regulator, Fis family  40 
 
 
455 aa  97.1  7e-20  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000574971 
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  45.6 
 
 
406 aa  96.7  1e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  43.8 
 
 
301 aa  96.7  1e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1430  acetoacetate metabolism regulatory protein AtoC  36.36 
 
 
461 aa  95.9  1e-19  Escherichia coli ATCC 8739  Bacteria  normal  0.324678  hitchhiker  0.00137179 
 
 
-
 
CP001509  ECD_02147  fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein  36.36 
 
 
461 aa  95.9  2e-19  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  35.2 
 
 
266 aa  95.5  2e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  36.36 
 
 
461 aa  95.9  2e-19  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
NC_009972  Haur_0818  two component transcriptional regulator  37.78 
 
 
267 aa  95.5  2e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000529672  n/a   
 
 
-
 
NC_010498  EcSMS35_2369  acetoacetate metabolism regulatory protein AtoC  39.62 
 
 
461 aa  95.5  2e-19  Escherichia coli SMS-3-5  Bacteria  normal  0.0790211  normal 
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  40.32 
 
 
470 aa  95.5  2e-19  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  36.36 
 
 
461 aa  95.9  2e-19  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_012892  B21_02106  hypothetical protein  36.36 
 
 
461 aa  95.9  2e-19  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3765  two component, sigma54 specific, Fis family transcriptional regulator  41.74 
 
 
463 aa  95.1  2e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.000821276  normal 
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  44.25 
 
 
151 aa  95.1  2e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  44.44 
 
 
127 aa  95.1  3e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_007519  Dde_3536  two component Fis family transcriptional regulator  33.1 
 
 
447 aa  95.1  3e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2366  two component, sigma54 specific, Fis family transcriptional regulator  37.29 
 
 
385 aa  94.4  4e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000342445  n/a   
 
 
-
 
NC_007298  Daro_2923  two component, sigma54 specific, Fis family transcriptional regulator  39.67 
 
 
450 aa  94.7  4e-19  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.726219 
 
 
-
 
NC_008554  Sfum_2806  two component, sigma54 specific, Fis family transcriptional regulator  42.74 
 
 
450 aa  94.7  4e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2853  two component, sigma54 specific, Fis family transcriptional regulator  37.59 
 
 
476 aa  94.4  5e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_2056  two component, sigma54 specific, transcriptional regulator, Fis family  40 
 
 
473 aa  94.4  5e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.732718  n/a   
 
 
-
 
NC_011145  AnaeK_1971  two component, sigma54 specific, transcriptional regulator, Fis family  40 
 
 
473 aa  94.4  5e-19  Anaeromyxobacter sp. K  Bacteria  normal  0.0887215  n/a   
 
 
-
 
NC_007498  Pcar_1960  response regulator transcription factor  38.79 
 
 
471 aa  94  6e-19  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_4257  two component, sigma54 specific, Fis family transcriptional regulator  43.93 
 
 
463 aa  94  6e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0008  sensory box histidine kinase/response regulator  42.37 
 
 
516 aa  94  7e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1951  two component, sigma54 specific, Fis family transcriptional regulator  40 
 
 
470 aa  94  7e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.516267  normal 
 
 
-
 
NC_007519  Dde_0692  response regulator receiver domain-containing protein  41.03 
 
 
145 aa  93.6  8e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_009943  Dole_1777  two component, sigma54 specific, Fis family transcriptional regulator  37.29 
 
 
465 aa  93.6  8e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0324  two component, sigma54 specific, transcriptional regulator, Fis family  38.81 
 
 
465 aa  93.6  8e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.266606  n/a   
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  39.52 
 
 
382 aa  93.6  9e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_013223  Dret_0097  two component, sigma54 specific, transcriptional regulator, Fis family  34.4 
 
 
448 aa  93.2  9e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_2392  two component, sigma54 specific, transcriptional regulator, Fis family  38.35 
 
 
458 aa  93.6  9e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0321511  normal 
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  39.52 
 
 
470 aa  93.2  1e-18  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_011883  Ddes_0853  two component, sigma54 specific, transcriptional regulator, Fis family  40.17 
 
 
459 aa  92.8  1e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0538681  n/a   
 
 
-
 
NC_011145  AnaeK_0313  two component, sigma54 specific, transcriptional regulator, Fis family  45.1 
 
 
465 aa  93.2  1e-18  Anaeromyxobacter sp. K  Bacteria  normal  0.0494225  n/a   
 
 
-
 
NC_011146  Gbem_0010  multi-sensor signal transduction histidine kinase  41.04 
 
 
511 aa  93.2  1e-18  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1908  two component, sigma54 specific, Fis family transcriptional regulator  39.13 
 
 
473 aa  92.8  1e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1992  two component, sigma54 specific, Fis family transcriptional regulator  39.82 
 
 
460 aa  93.2  1e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  38.89 
 
 
461 aa  93.2  1e-18  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_013173  Dbac_0976  anti-sigma-factor antagonist  38.46 
 
 
237 aa  93.2  1e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  37.72 
 
 
451 aa  92.8  1e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_011145  AnaeK_1886  two component, sigma54 specific, transcriptional regulator, Fis family  39.82 
 
 
461 aa  93.2  1e-18  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1657  two component, sigma54 specific, Fis family transcriptional regulator  41.53 
 
 
459 aa  93.2  1e-18  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.000574549  normal  0.302016 
 
 
-
 
NC_002947  PP_1401  two component, sigma54 specific, transcriptional regulator, Fis family  40.68 
 
 
444 aa  92.8  2e-18  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
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