Gene Haur_0818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0818 
Symbol 
ID5732719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp925874 
End bp926677 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content52% 
IMG OID641277950 
Producttwo component transcriptional regulator 
Protein accessionYP_001543594 
Protein GI159897347 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000529672 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAG CTTCGATTTT ATTAGTTGAT GATGAATTTC CCATTCGCGC CACCCTCGGC 
GATTTACTGC GGCGACGGGG CTACGATGTG CAAACTGCCG ATAGCGGAGA GGAAGCACTC
GACCGCATTG CCCAACGGCC TTTCGATTTG TTTCTTTTGG ATTTGCGCTT GCCTGGCGTT
GATGGCATTA CCGTGGCGCA ACGGGTACGC GAACGCTATC CCGATGCAGC AATTTTGATT
TTGACCGGCC ATGGCTCGCT CGATAGCGCG ATCGAAGGCA TTCATTTGGG TGTGTTCGAC
TATATGCTCA AAACTTCTAG CCCGCAAGAT GTGCTGGCGC GAGTCAAGAG TGCGCTTGAG
GCTCAAGCCG ATCAACGGCA TAAAAAAAGC CTCATGAATA CGCTACAAAC GGTGGTTAGC
GAGCTTGGTG GCAAACAACA AGAGCCAAGC GAAACCCCAA CTCAACAGCC AGCTGGCGAT
CAATGGATTC GCGTCGGTGA GCTAGAAATT GGCTTATGGC GACAAATGGC GCGGCTTGGC
GACCAAACCC TGAATCTCAC GCCAACCGAA TTTCGTTTGT TGAGTTGTTT GGCTCAGCAA
GCAGGATTGG TGATGAGCTA CGCCAATTTG TTACGTTGTG CCCAAGGCTA CGAGGCCGAA
AGCAGCGAAG CCGCCGAATT GCTCAAACCG CATATCTACC ACTTGCGCCA AAAGATCGAG
CCAGATCCAT CAAATCCACG CTATATTTTG ACCGTGCGTG GCACTGGCTA TGTCTTGGCA
GTCGAAGCAC CCCAAAGTAA GTAA
 
Protein sequence
MSQASILLVD DEFPIRATLG DLLRRRGYDV QTADSGEEAL DRIAQRPFDL FLLDLRLPGV 
DGITVAQRVR ERYPDAAILI LTGHGSLDSA IEGIHLGVFD YMLKTSSPQD VLARVKSALE
AQADQRHKKS LMNTLQTVVS ELGGKQQEPS ETPTQQPAGD QWIRVGELEI GLWRQMARLG
DQTLNLTPTE FRLLSCLAQQ AGLVMSYANL LRCAQGYEAE SSEAAELLKP HIYHLRQKIE
PDPSNPRYIL TVRGTGYVLA VEAPQSK