174 homologs were found in PanDaTox collection
for query gene Suden_0527 on replicon NC_007575
Organism: Sulfurimonas denitrificans DSM 1251



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007575  Suden_0527  Holliday junction resolvase-like protein  100 
 
 		 130 aa  265  1e-70  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  1  n/a   
 
 
-
 
NC_013512  Sdel_0873  Holliday junction resolvase YqgF  58.27 
 
 		 135 aa  154  4e-37  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.0928843  n/a   
 
 
-
 
NC_012039  Cla_0945  Holliday junction resolvase-like protein  49.6 
 
 		 128 aa  132  1.9999999999999998e-30  Campylobacter lari RM2100  Bacteria  normal  0.854613  n/a   
 
 
-
 
NC_009714  CHAB381_0377  Holliday junction resolvase-like protein  54.1 
 
 		 127 aa  129  1.0000000000000001e-29  Campylobacter hominis ATCC BAA-381  Bacteria  normal  1  n/a   
 
 
-
 
NC_009715  CCV52592_1578  Holliday junction resolvase-like protein  52 
 
 		 127 aa  127  7.000000000000001e-29  Campylobacter curvus 525.92  Bacteria  normal  1  n/a   
 
 
-
 
NC_008599  CFF8240_1124  Holliday junction resolvase-like protein  51.22 
 
 		 124 aa  125  1.0000000000000001e-28  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.0662125  n/a   
 
 
-
 
NC_003912  CJE0738  Holliday junction resolvase-like protein  46.03 
 
 		 127 aa  114  3.9999999999999997e-25  Campylobacter jejuni RM1221  Bacteria  normal  0.53595  n/a   
 
 
-
 
NC_008787  CJJ81176_0663  Holliday junction resolvase-like protein  45.24 
 
 		 127 aa  112  1.0000000000000001e-24  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.907248  n/a   
 
 
-
 
NC_009707  JJD26997_1364  Holliday junction resolvase-like protein  44.44 
 
 		 129 aa  112  2.0000000000000002e-24  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.451878  n/a   
 
 
-
 
NC_009675  Anae109_2535  Holliday junction resolvase-like protein  37.04 
 
 		 137 aa  65.1  0.0000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.52249 
 
 
-
 
NC_011353  ECH74115_4252  Holliday junction resolvase-like protein  32.06 
 
 		 138 aa  63.9  0.0000000008  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.367892  normal  0.370097 
 
 
-
 
CP001509  ECD_02779  Holliday junction resolvase-like protein  31.06 
 
 		 138 aa  63.5  0.000000001  Escherichia coli BL21(DE3)  Bacteria  normal  0.358182  n/a   
 
 
-
 
CP001637  EcDH1_0746  Holliday junction resolvase YqgF  31.3 
 
 		 138 aa  63.2  0.000000001  Escherichia coli DH1  Bacteria  normal  0.61838  n/a   
 
 
-
 
NC_010658  SbBS512_E3381  Holliday junction resolvase-like protein  31.3 
 
 		 138 aa  63.2  0.000000001  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_0765  Holliday junction resolvase-like protein  31.3 
 
 		 138 aa  63.2  0.000000001  Escherichia coli ATCC 8739  Bacteria  normal  0.809741  hitchhiker  0.0000191582 
 
 
-
 
NC_012892  B21_02742  hypothetical protein  31.06 
 
 		 138 aa  63.5  0.000000001  Escherichia coli BL21  Bacteria  normal  0.395069  n/a   
 
 
-
 
NC_011094  SeSA_A3271  Holliday junction resolvase-like protein  31.3 
 
 		 138 aa  63.2  0.000000001  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  0.0744312 
 
 
-
 
NC_011083  SeHA_C3336  Holliday junction resolvase-like protein  31.3 
 
 		 138 aa  63.2  0.000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.392173 
 
 
-
 
NC_011149  SeAg_B3260  Holliday junction resolvase-like protein  31.3 
 
 		 138 aa  63.2  0.000000001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.254908  n/a   
 
 
-
 
NC_010498  EcSMS35_3091  Holliday junction resolvase-like protein  31.3 
 
 		 138 aa  63.2  0.000000001  Escherichia coli SMS-3-5  Bacteria  normal  0.372008  decreased coverage  0.00000514809 
 
 
-
 
NC_011080  SNSL254_A3344  Holliday junction resolvase-like protein  31.3 
 
 		 138 aa  63.2  0.000000001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.130119  normal  0.247443 
 
 
-
 
NC_009800  EcHS_A3107  Holliday junction resolvase-like protein  31.3 
 
 		 138 aa  63.2  0.000000001  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_3292  Holliday junction resolvase-like protein  31.3 
 
 		 138 aa  63.2  0.000000001  Escherichia coli E24377A  Bacteria  normal  0.684819  n/a   
 
 
-
 
NC_004347  SO_3347  Holliday junction resolvase-like protein  31.01 
 
 		 141 aa  62.4  0.000000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011205  SeD_A3440  Holliday junction resolvase-like protein  31.3 
 
 		 138 aa  62.8  0.000000002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  hitchhiker  0.00956364 
 
 
-
 
NC_008345  Sfri_2849  Holliday junction resolvase-like protein  31.82 
 
 		 139 aa  62  0.000000003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_010622  Bphy_2326  Holliday junction resolvase-like protein  34.65 
 
 		 151 aa  61.2  0.000000004  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.0635951 
 
 
-
 
NC_009436  Ent638_3353  Holliday junction resolvase-like protein  29.77 
 
 		 138 aa  58.9  0.00000002  Enterobacter sp. 638  Bacteria  normal  0.2584  decreased coverage  0.0020385 
 
 
-
 
NC_008321  Shewmr4_1198  Holliday junction resolvase-like protein  31.85 
 
 		 141 aa  58.5  0.00000003  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000276178  normal  1 
 
 
-
 
NC_008322  Shewmr7_1269  Holliday junction resolvase-like protein  31.85 
 
 		 141 aa  58.5  0.00000003  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000329275  normal  1 
 
 
-
 
NC_008577  Shewana3_1199  Holliday junction resolvase-like protein  31.85 
 
 		 141 aa  58.5  0.00000003  Shewanella sp. ANA-3  Bacteria  normal  0.0107111  normal  0.529497 
 
 
-
 
NC_009438  Sputcn32_2682  Holliday junction resolvase-like protein  31.62 
 
 		 141 aa  58.5  0.00000003  Shewanella putrefaciens CN-32  Bacteria  normal  0.0331396  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  32.62 
 
 		 146 aa  58.2  0.00000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_010465  YPK_0836  Holliday junction resolvase-like protein  30.83 
 
 		 140 aa  57.8  0.00000005  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0695104  n/a   
 
 
-
 
NC_010159  YpAngola_A3340  Holliday junction resolvase-like protein  30.83 
 
 		 140 aa  57.8  0.00000005  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_2473  Holliday junction resolvase-like protein  28.03 
 
 		 139 aa  57.8  0.00000005  Shewanella amazonensis SB2B  Bacteria  normal  0.641283  normal  1 
 
 
-
 
NC_009708  YpsIP31758_0834  Holliday junction resolvase-like protein  30.83 
 
 		 140 aa  57.8  0.00000005  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_013223  Dret_1130  Holliday junction resolvase YqgF  32.33 
 
 		 142 aa  57.4  0.00000006  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006348  BMA1996  Holliday junction resolvase-like protein  34.62 
 
 		 146 aa  57.4  0.00000006  Burkholderia mallei ATCC 23344  Bacteria  normal  0.391575  n/a   
 
 
-
 
NC_007434  BURPS1710b_3169  Holliday junction resolvase-like protein  34.62 
 
 		 146 aa  57.4  0.00000006  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_1343  Holliday junction resolvase-like protein  30.88 
 
 		 141 aa  57.4  0.00000006  Shewanella baltica OS223  Bacteria  hitchhiker  0.00897927  hitchhiker  0.00000000052642 
 
 
-
 
NC_007954  Sden_2673  Holliday junction resolvase-like protein  27.27 
 
 		 141 aa  57.4  0.00000006  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.0000201914  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0917  Holliday junction resolvase-like protein  34.62 
 
 		 146 aa  57.4  0.00000006  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A2747  Holliday junction resolvase-like protein  34.62 
 
 		 146 aa  57.4  0.00000006  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_3020  Holliday junction resolvase-like protein  30.88 
 
 		 141 aa  57.4  0.00000006  Shewanella baltica OS155  Bacteria  hitchhiker  0.00101053  n/a   
 
 
-
 
NC_009076  BURPS1106A_3147  Holliday junction resolvase-like protein  34.62 
 
 		 146 aa  57.4  0.00000006  Burkholderia pseudomallei 1106a  Bacteria  normal  0.822464  n/a   
 
 
-
 
NC_009080  BMA10247_1858  Holliday junction resolvase-like protein  34.62 
 
 		 146 aa  57.4  0.00000006  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_3035  Holliday junction resolvase-like protein  30.88 
 
 		 141 aa  57.4  0.00000006  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000814628  n/a   
 
 
-
 
NC_009997  Sbal195_3178  Holliday junction resolvase-like protein  30.88 
 
 		 141 aa  57.4  0.00000006  Shewanella baltica OS195  Bacteria  hitchhiker  0.000555794  normal  0.0157194 
 
 
-
 
NC_012917  PC1_3713  Holliday junction resolvase-like protein  32.56 
 
 		 139 aa  57.4  0.00000007  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0641904  n/a   
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  32.12 
 
 		 150 aa  57.4  0.00000007  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal  1 
 
 
-
 
NC_009074  BURPS668_3111  Holliday junction resolvase-like protein  34.62 
 
 		 146 aa  57.4  0.00000007  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_1143  Holliday junction resolvase-like protein  28.68 
 
 		 139 aa  57.4  0.00000007  Shewanella loihica PV-4  Bacteria  normal  0.997205  normal  0.0325702 
 
 
-
 
NC_006368  lpp0637  Holliday junction resolvase-like protein  28.03 
 
 		 139 aa  57  0.00000008  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013730  Slin_5430  Holliday junction resolvase YqgF  34.07 
 
 		 142 aa  57  0.00000008  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011312  VSAL_I0546  Holliday junction resolvase-like protein  29.32 
 
 		 141 aa  57  0.00000009  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_007651  BTH_I1463  Holliday junction resolvase-like protein  33.85 
 
 		 146 aa  56.6  0.0000001  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1251  Holliday junction resolvase-like protein  30.3 
 
 		 148 aa  55.8  0.0000002  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_006369  lpl0621  Holliday junction resolvase-like protein  27.82 
 
 		 139 aa  55.5  0.0000002  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007614  Nmul_A2479  Holliday junction resolvase-like protein  30.3 
 
 		 151 aa  55.8  0.0000002  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_010681  Bphyt_0869  Holliday junction resolvase-like protein  33.85 
 
 		 146 aa  55.5  0.0000002  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.0747835 
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  32.33 
 
 		 141 aa  55.8  0.0000002  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal  1 
 
 
-
 
NC_010084  Bmul_2523  Holliday junction resolvase-like protein  34.85 
 
 		 149 aa  55.8  0.0000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.159244 
 
 
-
 
NC_007510  Bcep18194_A3963  Holliday junction resolvase-like protein  34.81 
 
 		 149 aa  54.7  0.0000004  Burkholderia sp. 383  Bacteria  normal  1  normal  0.539384 
 
 
-
 
NC_010508  Bcenmc03_0836  Holliday junction resolvase-like protein  34.09 
 
 		 149 aa  54.7  0.0000004  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.311364  hitchhiker  0.00221177 
 
 
-
 
NC_007951  Bxe_A3810  Holliday junction resolvase-like protein  33.08 
 
 		 146 aa  54.7  0.0000004  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008060  Bcen_0383  Holliday junction resolvase-like protein  34.09 
 
 		 149 aa  54.7  0.0000004  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008542  Bcen2424_0865  Holliday junction resolvase-like protein  34.09 
 
 		 149 aa  54.7  0.0000004  Burkholderia cenocepacia HI2424  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_3911  Holliday junction resolvase-like protein  32.06 
 
 		 139 aa  54.3  0.0000006  Pectobacterium wasabiae WPP163  Bacteria  normal  0.0877728  n/a   
 
 
-
 
NC_011126  HY04AAS1_0205  Holliday junction resolvase YqgF  32.54 
 
 		 123 aa  53.9  0.0000007  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_1236  Holliday junction resolvase-like protein  28.36 
 
 		 139 aa  53.5  0.0000008  Shewanella sediminis HAW-EB3  Bacteria  normal  0.578906  normal  0.405452 
 
 
-
 
NC_014150  Bmur_2800  Holliday junction resolvase YqgF  30.77 
 
 		 141 aa  53.5  0.0000009  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_1790  Holliday junction resolvase YqgF  30.53 
 
 		 133 aa  53.5  0.000001  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00751815  n/a   
 
 
-
 
NC_010551  BamMC406_0755  Holliday junction resolvase-like protein  33.58 
 
 		 149 aa  53.1  0.000001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.302865  normal  0.26532 
 
 
-
 
NC_008390  Bamb_0738  Holliday junction resolvase-like protein  33.58 
 
 		 149 aa  53.1  0.000001  Burkholderia ambifaria AMMD  Bacteria  normal  0.89107  n/a   
 
 
-
 
NC_008709  Ping_1285  Holliday junction resolvase YqgF  29.01 
 
 		 145 aa  53.1  0.000001  Psychromonas ingrahamii 37  Bacteria  normal  0.0394867  normal  1 
 
 
-
 
NC_010506  Swoo_1336  Holliday junction resolvase-like protein  28.68 
 
 		 139 aa  53.1  0.000001  Shewanella woodyi ATCC 51908  Bacteria  normal  0.164432  hitchhiker  0.000378103 
 
 
-
 
NC_009832  Spro_4028  Holliday junction resolvase-like protein  30.08 
 
 		 140 aa  53.5  0.000001  Serratia proteamaculans 568  Bacteria  normal  0.290268  hitchhiker  0.00115108 
 
 
-
 
NC_009901  Spea_1131  Holliday junction resolvase-like protein  28.89 
 
 		 141 aa  53.1  0.000001  Shewanella pealeana ATCC 700345  Bacteria  normal  0.111461  n/a   
 
 
-
 
NC_007298  Daro_3892  Holliday junction resolvase-like protein  27.61 
 
 		 146 aa  52.4  0.000002  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011138  MADE_03294  Holliday junction resolvase-like protein  29.69 
 
 		 143 aa  52.8  0.000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.659098  n/a   
 
 
-
 
NC_007404  Tbd_2580  Holliday junction resolvase-like protein  31.01 
 
 		 145 aa  52.4  0.000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.0863234 
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  33.8 
 
 		 137 aa  52.4  0.000002  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_008816  A9601_08551  endonuclease  29.46 
 
 		 153 aa  52.4  0.000002  Prochlorococcus marinus str. AS9601  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_0540  Holliday junction resolvase YqgF  32.33 
 
 		 156 aa  52.8  0.000002  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  29.85 
 
 		 139 aa  52  0.000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  29.85 
 
 		 139 aa  52  0.000003  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.0212683 
 
 
-
 
NC_012880  Dd703_0543  Holliday junction resolvase-like protein  27.82 
 
 		 139 aa  51.6  0.000003  Dickeya dadantii Ech703  Bacteria  normal  0.0491649  n/a   
 
 
-
 
NC_002978  WD0143  hypothetical protein  30.23 
 
 		 155 aa  51.6  0.000004  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  0.906758  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  31.01 
 
 		 145 aa  51.2  0.000004  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_009091  P9301_08521  endonuclease  29.46 
 
 		 153 aa  51.6  0.000004  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.329669  n/a   
 
 
-
 
NC_004578  PSPTO_5038  hypothetical protein  32.31 
 
 		 146 aa  51.2  0.000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_0500  Holliday junction resolvase-like protein  27.82 
 
 		 143 aa  51.2  0.000005  Dickeya zeae Ech1591  Bacteria  normal  0.23587  n/a   
 
 
-
 
NC_010531  Pnec_0265  Holliday junction resolvase-like protein  28.36 
 
 		 147 aa  50.8  0.000006  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_4616  Holliday junction resolvase-like protein  34.62 
 
 		 153 aa  50.4  0.000008  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_03575  Holliday junction resolvase-like protein  30.3 
 
 		 136 aa  50.4  0.000008  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007912  Sde_3638  Holliday junction resolvase-like protein  30.37 
 
 		 142 aa  50.4  0.000009  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007005  Psyr_0484  Holliday junction resolvase-like protein  32.82 
 
 		 146 aa  50.1  0.00001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  30.83 
 
 		 139 aa  49.7  0.00001  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
-
 
NC_008309  HS_0010  Holliday junction resolvase-like protein  30 
 
 		 141 aa  50.1  0.00001  Haemophilus somnus 129PT  Bacteria  normal  1  n/a   
 
 
-
 
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