| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9301_08521 |
|---|
| Symbol | |
|---|
| ID | 4911185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9301 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009091 |
|---|
| Strand | - |
|---|
| Start bp | 739168 |
|---|
| End bp | 739629 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640160434 |
|---|
| Product | endonuclease |
|---|
| Protein accession | YP_001091076 |
|---|
| Protein GI | 126696190 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
|---|
| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.329669 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAATTTT GCAAACCCAA GCCCAAATCA ATTTTGAGTT TGGATATAGG TTCCAAAAGA
ATAGGATTAG CTTATTGTGA TCCCCTCTGC ATAACATCAA ATATACTTCC AGCAGTAAAA
CGATTTGAAA ATAATCAAGA GATTAAAATC ATTAGAAATT ATATAAATGA ATTTAATTTG
ACTGGTTTTA TTGTGGGTAT TCCGCTAGAT GAGAAAGGTA AAATGACCAC TCAAGCTATT
GACTGTAAAA ATTACGGTCA ATTACTTTCA AATGAATTAA AGCTTCCATT TTCTTATGTC
AACGAACATA GTTCAACTTG GGAATCTTCA GAAAGATTTG GAATAAAAAA AGATAAATCC
GGATTAATTG ATAGTTTTTC AGCAAAAATA ATACTTGAAC AATGGATCGA AGAGGGTCCT
GAATTAGAAG AAATAGCTGG TAAACGTCAG ATAAAAGATT AG
|
|---|
| Protein sequence | MKFCKPKPKS ILSLDIGSKR IGLAYCDPLC ITSNILPAVK RFENNQEIKI IRNYINEFNL
TGFIVGIPLD EKGKMTTQAI DCKNYGQLLS NELKLPFSYV NEHSSTWESS ERFGIKKDKS
GLIDSFSAKI ILEQWIEEGP ELEEIAGKRQ IKD
|
|---|
| |