Gene VSAL_I0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0546 
SymbolyqgF 
ID6988986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand- 
Start bp599983 
End bp600408 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content42% 
IMG OID643378932 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_002262067 
Protein GI209694139 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCAC GCACCATCAT GGCATTTGAT TTTGGCACAA AAAGCATTGG CTCAGCCATT 
GGGCAAGAAA TCACAGGTAC CGCAAGTCCA TTAAAAGCGT TTAAAGCTCA AGATGGCACC 
CCTAATTGGG ATGATATTGA AAAGCAAATT AAAGAGTGGC AACCTGATTT GATCGTTGTT 
GGTCTACCAA CCGATCTTCA TGGTAAAGAG TTAGACGTTA TCACACCAAA AGCAAAGAAA 
TTTGCTAACC GTCTGCACGG TCGTTTTGGT AATCAAGTCG AACTGCACGA TGAACGCTTA 
TCAACCGTAG AAGCTCGCGC TGATTTATTT GAATTCGGTG GCTATAAAGC ATTATCAAAA 
GGCAATGTCG ATTGCCAATC TGCCGTTGTT ATTTTAGAAA GTTGGTTTGA GAGTCAATGG 
GGCTAA
 
Protein sequence
MSSRTIMAFD FGTKSIGSAI GQEITGTASP LKAFKAQDGT PNWDDIEKQI KEWQPDLIVV 
GLPTDLHGKE LDVITPKAKK FANRLHGRFG NQVELHDERL STVEARADLF EFGGYKALSK 
GNVDCQSAVV ILESWFESQW G