More than 300 homologs were found in PanDaTox collection
for query gene Sked_24160 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_24160  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  100 
 
 
292 aa  551  1e-156  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.955581  normal 
 
 
-
 
NC_014151  Cfla_1436  binding-protein-dependent transport systems inner membrane component  80.54 
 
 
260 aa  329  4e-89  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.590025 
 
 
-
 
NC_012669  Bcav_2574  binding-protein-dependent transport systems inner membrane component  57.09 
 
 
252 aa  234  2.0000000000000002e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  35.66 
 
 
288 aa  132  6.999999999999999e-30  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  37.9 
 
 
306 aa  132  9e-30  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  32.58 
 
 
268 aa  123  4e-27  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_011369  Rleg2_3042  binding-protein-dependent transport systems inner membrane component  35.68 
 
 
375 aa  121  1.9999999999999998e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  35.17 
 
 
322 aa  120  3e-26  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
283 aa  120  3.9999999999999996e-26  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  32.51 
 
 
279 aa  120  3.9999999999999996e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  34.11 
 
 
281 aa  118  9.999999999999999e-26  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  34.15 
 
 
289 aa  118  9.999999999999999e-26  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  33.89 
 
 
303 aa  115  6.9999999999999995e-25  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  31.85 
 
 
249 aa  115  1.0000000000000001e-24  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  35.75 
 
 
281 aa  114  1.0000000000000001e-24  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3297  binding-protein-dependent transport systems inner membrane component  35.12 
 
 
375 aa  114  2.0000000000000002e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.149558 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  31.28 
 
 
258 aa  112  7.000000000000001e-24  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
286 aa  111  1.0000000000000001e-23  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0037  binding-protein-dependent transport systems inner membrane component  35.75 
 
 
362 aa  111  1.0000000000000001e-23  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3455  binding-protein dependent transport system inner membrane protein  37.14 
 
 
322 aa  111  2.0000000000000002e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.833863  n/a   
 
 
-
 
NC_007802  Jann_1473  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
283 aa  110  2.0000000000000002e-23  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2700  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
316 aa  110  3e-23  Jannaschia sp. CCS1  Bacteria  normal  0.505407  normal  0.565906 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  34.06 
 
 
273 aa  109  5e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0344  binding-protein-dependent transport systems inner membrane component  30.65 
 
 
286 aa  108  9.000000000000001e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.113814  n/a   
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  31.08 
 
 
257 aa  108  1e-22  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0801  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  31.2 
 
 
298 aa  107  2e-22  Burkholderia xenovorans LB400  Bacteria  normal  0.0745387  normal 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  34.38 
 
 
274 aa  106  4e-22  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  35.05 
 
 
257 aa  106  4e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2867  binding-protein-dependent transport systems inner membrane component  30 
 
 
277 aa  106  4e-22  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  30.83 
 
 
282 aa  105  8e-22  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  31.71 
 
 
250 aa  105  1e-21  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  28.88 
 
 
263 aa  103  2e-21  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_010172  Mext_1731  binding-protein-dependent transport systems inner membrane component  34.42 
 
 
321 aa  103  4e-21  Methylobacterium extorquens PA1  Bacteria  normal  0.443029  normal 
 
 
-
 
NC_012791  Vapar_0620  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
258 aa  103  4e-21  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  31.22 
 
 
250 aa  102  6e-21  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  27.78 
 
 
265 aa  102  6e-21  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  32.23 
 
 
268 aa  102  8e-21  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  32.92 
 
 
256 aa  102  8e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_010725  Mpop_1083  binding-protein-dependent transport systems inner membrane component  35.53 
 
 
321 aa  102  9e-21  Methylobacterium populi BJ001  Bacteria  normal  0.148611  normal  0.032179 
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  31.22 
 
 
250 aa  102  1e-20  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  31.22 
 
 
250 aa  101  1e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  32.48 
 
 
251 aa  101  1e-20  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_013093  Amir_4887  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
267 aa  102  1e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  31.22 
 
 
250 aa  102  1e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_014212  Mesil_0817  ABC transporter related protein  32.29 
 
 
492 aa  101  1e-20  Meiothermus silvanus DSM 9946  Bacteria  normal  0.309085  normal  0.730271 
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  31.22 
 
 
250 aa  102  1e-20  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  31.71 
 
 
251 aa  102  1e-20  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2050  binding-protein-dependent transport systems inner membrane component  33.95 
 
 
321 aa  102  1e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.577348 
 
 
-
 
NC_009485  BBta_6031  putative ABC transporter, permease protein  31.02 
 
 
325 aa  101  1e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  29.46 
 
 
260 aa  100  2e-20  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_013946  Mrub_1884  binding-protein-dependent transport systems inner membrane component  30.26 
 
 
307 aa  101  2e-20  Meiothermus ruber DSM 1279  Bacteria  normal  0.665089  normal  0.160596 
 
 
-
 
NC_007951  Bxe_A2015  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  35.22 
 
 
252 aa  101  2e-20  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3552  ABC transporter membrane spanning protein  31.14 
 
 
285 aa  100  2e-20  Agrobacterium vitis S4  Bacteria  normal  0.0625026  n/a   
 
 
-
 
NC_012848  Rleg_4665  binding-protein-dependent transport systems inner membrane component  32.11 
 
 
284 aa  100  2e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.65192 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  32.33 
 
 
273 aa  100  2e-20  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  31.22 
 
 
251 aa  101  2e-20  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  31.22 
 
 
250 aa  100  3e-20  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  30.29 
 
 
256 aa  100  3e-20  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2100  binding-protein-dependent transport systems inner membrane component  29.78 
 
 
275 aa  100  3e-20  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1465  binding-protein-dependent transport systems inner membrane component  33.06 
 
 
283 aa  100  3e-20  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  31.65 
 
 
261 aa  99.8  4e-20  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_011369  Rleg2_1676  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
287 aa  99.8  4e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00381914  normal 
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  31.22 
 
 
251 aa  100  4e-20  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_011725  BCB4264_A0446  putative ABC transporter, permease protein  30.33 
 
 
257 aa  99.8  5e-20  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1813  binding-protein-dependent transport systems inner membrane component  33.73 
 
 
283 aa  99.8  5e-20  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.210707  normal  0.296576 
 
 
-
 
NC_010184  BcerKBAB4_0362  binding-protein-dependent transport systems inner membrane component  30.33 
 
 
255 aa  99  8e-20  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3658  binding-protein-dependent transport systems inner membrane component  32.05 
 
 
245 aa  99  8e-20  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4878  putative ABC transporter, permease protein  30.33 
 
 
255 aa  99  8e-20  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0258  binding-protein-dependent transport systems inner membrane component  36.06 
 
 
274 aa  99  9e-20  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.750925 
 
 
-
 
NC_007493  RSP_0180  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  33.06 
 
 
283 aa  98.6  1e-19  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.105797  n/a   
 
 
-
 
NC_008254  Meso_2962  binding-protein-dependent transport systems inner membrane component  31.86 
 
 
280 aa  98.6  1e-19  Chelativorans sp. BNC1  Bacteria  normal  0.0794658  n/a   
 
 
-
 
NC_010483  TRQ2_0450  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
222 aa  98.6  1e-19  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0435  binding-protein-dependent transport systems inner membrane component  30.69 
 
 
250 aa  98.6  1e-19  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1445  binding-protein-dependent transport systems inner membrane component  29.8 
 
 
259 aa  98.6  1e-19  Psychrobacter sp. PRwf-1  Bacteria  normal  normal  0.318112 
 
 
-
 
NC_013441  Gbro_0259  binding-protein-dependent transport systems inner membrane component  31.15 
 
 
453 aa  97.8  2e-19  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  34.58 
 
 
253 aa  97.8  2e-19  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  27.88 
 
 
265 aa  97.8  2e-19  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_0669  binding-protein-dependent transport systems inner membrane component  37.04 
 
 
258 aa  98.2  2e-19  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_008726  Mvan_3142  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
264 aa  97.8  2e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.32312  normal  0.0411868 
 
 
-
 
NC_003909  BCE_0491  ABC transporter, permease protein, putative  29.86 
 
 
257 aa  97.1  3e-19  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0367  ABC transporter permease  29.86 
 
 
265 aa  97.4  3e-19  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0357  ABC transporter, permease  29.86 
 
 
265 aa  97.4  3e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0424  putative ABC transporter, permease protein  29.86 
 
 
257 aa  97.1  3e-19  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_0381  ABC transporter permease  29.86 
 
 
257 aa  97.1  3e-19  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  30.54 
 
 
270 aa  97.1  3e-19  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1382  binding-protein-dependent transport systems inner membrane component  30.65 
 
 
285 aa  96.7  4e-19  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.13305  normal 
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  29.29 
 
 
266 aa  96.7  4e-19  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  29.29 
 
 
266 aa  96.3  6e-19  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_1625  binding-protein-dependent transport systems inner membrane component  28.98 
 
 
285 aa  96.3  6e-19  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0792607  normal  0.95709 
 
 
-
 
NC_011658  BCAH187_A0493  putative ABC transporter, permease protein  29.38 
 
 
257 aa  95.5  8e-19  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  33.18 
 
 
264 aa  95.5  9e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  35.91 
 
 
260 aa  95.1  1e-18  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  32.94 
 
 
259 aa  94.4  2e-18  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_011666  Msil_0772  binding-protein-dependent transport systems inner membrane component  31.54 
 
 
302 aa  94.4  2e-18  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0528102 
 
 
-
 
NC_008709  Ping_2376  ABC transporter substrate binding inner membrane protein  30.96 
 
 
265 aa  94.4  2e-18  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  33.18 
 
 
264 aa  94.7  2e-18  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0370  binding-protein-dependent transport systems inner membrane component  28.63 
 
 
256 aa  94  2e-18  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3871  binding-protein-dependent transport systems inner membrane component  29.49 
 
 
280 aa  93.6  3e-18  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.208081  n/a   
 
 
-
 
NC_012791  Vapar_5134  binding-protein-dependent transport systems inner membrane component  30.55 
 
 
294 aa  93.6  3e-18  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  29.5 
 
 
250 aa  94  3e-18  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
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