Gene Mpop_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1083 
Symbol 
ID6312812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1154532 
End bp1155497 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content73% 
IMG OID642649804 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001923793 
Protein GI188580348 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.148611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.032179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCC GCGCCGCACG GATCGGCCTG CTCACCCCCG CCGCCTTGAT CGGCGGGACG 
GCGCTCGCTC TTGCCGCCCA CCGGCCCGGC CTAACCGGCG CGGCCGGGCC GGGCTTCTGG
CTCGCCGCCT TCCTGGTCTG GCTGGCCGCC ACGTTGGCCG CGCGCGACAT CGCCGCCCTG
GAGCCGGGCC ATGCGGCGGG CCGCCGCCTC GTGCGGCTTT CCGTGCCGCT GCTGTTCGGG
CTCCTCGTTC TGGTGCTGTG GGAGGCCGTC GTCGTCGGGG CGGGCGTGCC CGCCGTGCTG
ATGCCGCCGC CCTCGGCGAT CGCCGCGCGC TTCACCACCG CGCTTCCGGT CCTCGGGGCG
GATTTCGTCC AGACCTGCCT GAAATCGGCC CTGCCCGGCT ACGTCATCGG CTGCCTGTCG
GGCCTCGGCG TCGCCATTCT GGCCGACCGG CTGCCCGTCC TCGGACGCGG CCTCCTGCCG
GTGGCGAACG TCGCCTCGGC GCTCCCGATC GTCGGCATCG CCCCGATCAT GGTGATGTGG
TTCGGCTTCG ACTGGCCGTC GAAGGCCGCG GTCGTCGCCG TGATGACCTT CTTCCCGATG
CTGGTCCAGG CCGGCGCCGG CCTCGCCGCC ACGGGCGGAA TCGAGCGCGA CCTGATGCGC
ACCTACGCGG CGGGCTATGG GCGCACGCTC CTGAGCCTGC GCCTGCCCAT GGCCCTGCCC
TTCCTGTTCA CCGCCCTGAA GGTCAACGCG ACGCTGGCGC TGATCGGGGC GATCGTGGCC
GAGTTCTTCG GTACGCCCAT CGTCGGCATG GGCTTTCGCA TCTCGATCGA GGCGGCGCGG
CTCTCCCTCG ACATGGTCTG GGCCGAGATC GCTCTGGCGG CCCTGGCGGG GTCGGCCTTC
TACGGCCTGA TCGCCCTGGC CGAGCGCGTC GCGACCGGCT GGCATCCATC GGTGCGCACC
GGCTGA
 
Protein sequence
MTRRAARIGL LTPAALIGGT ALALAAHRPG LTGAAGPGFW LAAFLVWLAA TLAARDIAAL 
EPGHAAGRRL VRLSVPLLFG LLVLVLWEAV VVGAGVPAVL MPPPSAIAAR FTTALPVLGA
DFVQTCLKSA LPGYVIGCLS GLGVAILADR LPVLGRGLLP VANVASALPI VGIAPIMVMW
FGFDWPSKAA VVAVMTFFPM LVQAGAGLAA TGGIERDLMR TYAAGYGRTL LSLRLPMALP
FLFTALKVNA TLALIGAIVA EFFGTPIVGM GFRISIEAAR LSLDMVWAEI ALAALAGSAF
YGLIALAERV ATGWHPSVRT G