Gene Mrub_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_1884 
Symbol 
ID8879992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp1943318 
End bp1944241 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content64% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003507661 
Protein GI291296263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.665089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.160596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACCT CGCCCAACCT GGTACCCATG CTGGTGGTGG CCCTGGTGGT GCTGGCGCTG 
TACTGGCCGC TAATGTACCT AGCCAACATC CCGGTAGCGC AGCGGGCCTT GGATACGGGC
GCGGCCCTGC CCTGCCAGAC TGCTTTCGAG TGTGCAACCC AGCTCAGGAG CCCGGTGCTG
CCCTCACCCC AGCAGCTCTG GAACGGCTTT GGCAACCTGA TGTTTCCCCT CAACTCACCC
AACGCCATTC CCGTCAACGC CGCCGTGACG GCCTTCGAGA CGGTGGTGGG TTTGCTGCTG
GCGGCGGTGG TGGGCTTCTT TTTTGCGATA GGGATGGTGG CCTCGAGGGC CTTTGAACGG
GCTTTGCTGC CCTGGATTGT GGCCTCCCAG ACCGTCCCCA TTATCGCCAT TGCGCCCATG
CTGGTGGTGC TGCTGGGGCA GTATGGGGTG CAGGGCTGGC TGCCCAAGGC CATCATCGCA
GCCTATATCG CCTTTTTCCC CATCACCATC GGGGTGGCCA AGGGTCTCAA AAGCCCCGAC
CCCATGGCCC TTGACCTGAT GAAAACCTAC AACGCCAGCC ACTGGCAGAC CTACCTTAAG
CTGCGCTTCC CGGCCTCGGT GCCCTATCTG TTTACGGCCT TCAAGGTCGC CATGACGGCG
GCCCTGATTG GGGCCATTGT GGCCGAGATC TCCACCATCA GCTTTCAGGG CATCGGCAAG
ATGCTAGCGG AGAACTCGAG GGCCTCGGAT GTGGTGGCGA TGTGGGTGAT CATGCTCTCC
TCGGCGGTGC TGGGAATCTT GCTGGTGGCC CTGGTGAACT GGCTCGAGCG CCTGCTTACG
CCCTGGCGGC GCCCCGCTGG AGGCACAGCG GTATCCGCTA ACGCCAAACA GGCCCGGCTG
CCTGGGCGGG AGGGGGTGGG TTGA
 
Protein sequence
MRTSPNLVPM LVVALVVLAL YWPLMYLANI PVAQRALDTG AALPCQTAFE CATQLRSPVL 
PSPQQLWNGF GNLMFPLNSP NAIPVNAAVT AFETVVGLLL AAVVGFFFAI GMVASRAFER
ALLPWIVASQ TVPIIAIAPM LVVLLGQYGV QGWLPKAIIA AYIAFFPITI GVAKGLKSPD
PMALDLMKTY NASHWQTYLK LRFPASVPYL FTAFKVAMTA ALIGAIVAEI STISFQGIGK
MLAENSRASD VVAMWVIMLS SAVLGILLVA LVNWLERLLT PWRRPAGGTA VSANAKQARL
PGREGVG