Gene Sked_24160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_24160 
Symbol 
ID8634051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2694402 
End bp2695280 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content74% 
IMG OID 
ProductABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
Protein accessionYP_003315164 
Protein GI269795709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.955581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG ACCATCTCGA GAGCACGTCC CAGCCCGTGT CGACCGCTCG GTCCGGTGAC 
ACGGTCCCGC CCGTGAGCCC AGCCAGGCGC ACCGCCTCCG GACGTGCCGT CGCCCGGTCC
ACCGGCGCCG TCCTGGCGAG CGTCGCCCCG CCCGTCGTCC TGCTCGCCGC GCTGCTCGCC
GCCTGGCAGG CCGCGGTCAC CCTCGGCGAC GTCCCGGCCT TCGTGCTCCC GGGCCCCTCG
GCCATCTTCT CCGAGCTCCG CGACCTCGCC GGGCCGATCA CCTCGGCGGC ACTGGTCACC
GGCCGCAACG CGCTCGTCGG CCTGGTCGTC GGTGCGCTGC TCGGCGTCCT GCTCGCGGTC
GTCGCGTCCT CCGCGCAGGT GGTGGACCGG CTGGGCGAGC CCGTCGTCAC CGCGCTGTCG
GTGGTCCCGG TCGTCGCCCT GGCCCCGGTC CTGTACTCCA TGTACGGGGC GGCCTCCGAG
CAGGCGCGCG TGATCGTCGC CGGCCTCGCC GTCTTCGTGC CCGTCTACGT CAACACCCTC
CGCGGCCTGC GGCAGGTGAC CCCGGTGCAC CGCGACCTCA TGCGGGCGCT CGCGGCGTCG
CCGCGCCAGG TGGCACTTAC CGTCACCGTC CCGACGGCCG TGCCCTTCGT CTTCACCGGG
CTGCGCATCG CCTCGTCGCT GGCGGTGATC TCGGCGATCG TGGCCGAGTA CTTCGGCGGG
CCGCGCTCCG GCATCGGGTC CTTCATCACG ACGGCCGCGT CGGGCTCCAA CTACGCCCGT
GCCTGGGCGT ACGTGCTCGG CGGGATCGTC GTCGGCCTCG TGTTCTTCAC CGTGACGGCG
CTCGCCGAGC ACCTCGCGAC ACGACGGAAG GCACGGTAG
 
Protein sequence
MTTDHLESTS QPVSTARSGD TVPPVSPARR TASGRAVARS TGAVLASVAP PVVLLAALLA 
AWQAAVTLGD VPAFVLPGPS AIFSELRDLA GPITSAALVT GRNALVGLVV GALLGVLLAV
VASSAQVVDR LGEPVVTALS VVPVVALAPV LYSMYGAASE QARVIVAGLA VFVPVYVNTL
RGLRQVTPVH RDLMRALAAS PRQVALTVTV PTAVPFVFTG LRIASSLAVI SAIVAEYFGG
PRSGIGSFIT TAASGSNYAR AWAYVLGGIV VGLVFFTVTA LAEHLATRRK AR