More than 300 homologs were found in PanDaTox collection
for query gene RSP_0180 on replicon NC_007493
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007493  RSP_0180  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  100 
 
 
283 aa  550  1e-156  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.105797  n/a   
 
 
-
 
NC_009049  Rsph17029_1813  binding-protein-dependent transport systems inner membrane component  98.94 
 
 
283 aa  545  1e-154  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.210707  normal  0.296576 
 
 
-
 
NC_009428  Rsph17025_1465  binding-protein-dependent transport systems inner membrane component  90.11 
 
 
283 aa  480  1e-134  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  72.86 
 
 
281 aa  395  1e-109  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  74.52 
 
 
303 aa  378  1e-104  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  70.23 
 
 
286 aa  373  1e-102  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  64.29 
 
 
289 aa  359  2e-98  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  62.95 
 
 
288 aa  358  6e-98  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0344  binding-protein-dependent transport systems inner membrane component  61.57 
 
 
286 aa  351  5.9999999999999994e-96  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.113814  n/a   
 
 
-
 
NC_011369  Rleg2_3042  binding-protein-dependent transport systems inner membrane component  61.9 
 
 
375 aa  343  2e-93  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3297  binding-protein-dependent transport systems inner membrane component  66.13 
 
 
375 aa  342  4e-93  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.149558 
 
 
-
 
NC_009485  BBta_6031  putative ABC transporter, permease protein  66.27 
 
 
325 aa  341  5.999999999999999e-93  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2700  binding-protein-dependent transport systems inner membrane component  66.28 
 
 
316 aa  324  1e-87  Jannaschia sp. CCS1  Bacteria  normal  0.505407  normal  0.565906 
 
 
-
 
NC_007643  Rru_A3455  binding-protein dependent transport system inner membrane protein  61.45 
 
 
322 aa  301  1e-80  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.833863  n/a   
 
 
-
 
NC_010172  Mext_1731  binding-protein-dependent transport systems inner membrane component  67.27 
 
 
321 aa  297  2e-79  Methylobacterium extorquens PA1  Bacteria  normal  0.443029  normal 
 
 
-
 
NC_011757  Mchl_2050  binding-protein-dependent transport systems inner membrane component  67.27 
 
 
321 aa  296  2e-79  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.577348 
 
 
-
 
NC_010725  Mpop_1083  binding-protein-dependent transport systems inner membrane component  66.52 
 
 
321 aa  286  2e-76  Methylobacterium populi BJ001  Bacteria  normal  0.148611  normal  0.032179 
 
 
-
 
NC_012880  Dd703_0037  binding-protein-dependent transport systems inner membrane component  53.72 
 
 
362 aa  257  1e-67  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  49.34 
 
 
306 aa  220  1.9999999999999999e-56  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  48.71 
 
 
322 aa  216  4e-55  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  37.4 
 
 
246 aa  145  1e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  36.17 
 
 
261 aa  140  1.9999999999999998e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
268 aa  139  6e-32  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_011831  Cagg_3116  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
272 aa  133  3e-30  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.025765  normal 
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  32.11 
 
 
268 aa  131  1.0000000000000001e-29  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
257 aa  131  2.0000000000000002e-29  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_009523  RoseRS_0669  binding-protein-dependent transport systems inner membrane component  38.86 
 
 
272 aa  129  5.0000000000000004e-29  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0848141 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
273 aa  129  6e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  32.53 
 
 
284 aa  128  9.000000000000001e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0666  binding-protein-dependent transport systems inner membrane component  39.3 
 
 
272 aa  128  1.0000000000000001e-28  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  35.89 
 
 
279 aa  126  3e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  37.05 
 
 
253 aa  126  4.0000000000000003e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  32.61 
 
 
254 aa  126  5e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  30.9 
 
 
274 aa  125  7e-28  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  31.85 
 
 
255 aa  124  2e-27  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  31.44 
 
 
283 aa  124  2e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  34.76 
 
 
251 aa  124  2e-27  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  31.98 
 
 
281 aa  123  4e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  34.24 
 
 
278 aa  122  7e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  29.55 
 
 
253 aa  122  7e-27  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
256 aa  121  9.999999999999999e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_007964  Nham_0427  binding-protein-dependent transport systems inner membrane component  34.5 
 
 
279 aa  121  9.999999999999999e-27  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0333  binding-protein dependent transport system inner membrane protein  35.18 
 
 
278 aa  120  1.9999999999999998e-26  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  32.92 
 
 
273 aa  120  3.9999999999999996e-26  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  34.9 
 
 
288 aa  119  7e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  31.85 
 
 
250 aa  119  7e-26  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  34.23 
 
 
257 aa  118  9.999999999999999e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2574  binding-protein-dependent transport systems inner membrane component  37.85 
 
 
252 aa  118  9.999999999999999e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3645  binding-protein-dependent transport systems inner membrane component  33.85 
 
 
268 aa  117  1.9999999999999998e-25  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0469  binding-protein-dependent transport systems inner membrane component  33.87 
 
 
274 aa  117  1.9999999999999998e-25  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.858995  n/a   
 
 
-
 
NC_009667  Oant_0278  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
258 aa  117  1.9999999999999998e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  29.88 
 
 
250 aa  116  3e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  31.45 
 
 
250 aa  116  3.9999999999999997e-25  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  30.68 
 
 
251 aa  116  3.9999999999999997e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  29.88 
 
 
250 aa  115  5e-25  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0572  binding-protein-dependent transport systems inner membrane component  35.16 
 
 
276 aa  116  5e-25  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  29.88 
 
 
250 aa  115  6e-25  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  29.88 
 
 
250 aa  115  6e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
258 aa  115  6e-25  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  29.88 
 
 
250 aa  115  6e-25  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  30.08 
 
 
265 aa  115  7.999999999999999e-25  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  36.02 
 
 
250 aa  114  1.0000000000000001e-24  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  37.99 
 
 
260 aa  114  1.0000000000000001e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  30.68 
 
 
249 aa  115  1.0000000000000001e-24  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  32.63 
 
 
259 aa  114  2.0000000000000002e-24  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  32.37 
 
 
282 aa  114  2.0000000000000002e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_010511  M446_3606  binding-protein-dependent transport systems inner membrane component  33.61 
 
 
257 aa  114  2.0000000000000002e-24  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.071611 
 
 
-
 
NC_004310  BR0211  ABC transporter, permease protein  32.94 
 
 
258 aa  113  3e-24  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  34.84 
 
 
247 aa  113  4.0000000000000004e-24  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  31.51 
 
 
251 aa  113  4.0000000000000004e-24  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  30.65 
 
 
251 aa  113  4.0000000000000004e-24  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_009505  BOV_0202  ABC transporter, permease protein  33.62 
 
 
258 aa  112  5e-24  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A2015  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  30.36 
 
 
252 aa  112  6e-24  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  34.57 
 
 
281 aa  112  7.000000000000001e-24  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  30.28 
 
 
250 aa  112  7.000000000000001e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  29.61 
 
 
271 aa  112  1.0000000000000001e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010681  Bphyt_1488  binding-protein-dependent transport systems inner membrane component  32.66 
 
 
247 aa  112  1.0000000000000001e-23  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  30.63 
 
 
264 aa  110  2.0000000000000002e-23  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  29.85 
 
 
264 aa  110  2.0000000000000002e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_007953  Bxe_C0801  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  31.27 
 
 
298 aa  110  2.0000000000000002e-23  Burkholderia xenovorans LB400  Bacteria  normal  0.0745387  normal 
 
 
-
 
NC_013946  Mrub_1076  ABC transporter-like protein  35.11 
 
 
488 aa  111  2.0000000000000002e-23  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.276573 
 
 
-
 
NC_013093  Amir_2627  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
288 aa  110  2.0000000000000002e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752734  n/a   
 
 
-
 
NC_012791  Vapar_0620  binding-protein-dependent transport systems inner membrane component  30.9 
 
 
258 aa  110  2.0000000000000002e-23  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0926  binding-protein-dependent transport systems inner membrane component  32 
 
 
249 aa  110  3e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.04587  n/a   
 
 
-
 
NC_008312  Tery_1625  binding-protein-dependent transport systems inner membrane component  29.8 
 
 
285 aa  109  4.0000000000000004e-23  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0792607  normal  0.95709 
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  33.33 
 
 
308 aa  110  4.0000000000000004e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0258  binding-protein-dependent transport systems inner membrane component  38.76 
 
 
274 aa  109  5e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.750925 
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  32.54 
 
 
270 aa  109  6e-23  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0435  binding-protein-dependent transport systems inner membrane component  28.51 
 
 
250 aa  108  7.000000000000001e-23  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_1473  binding-protein-dependent transport systems inner membrane component  31.39 
 
 
283 aa  108  7.000000000000001e-23  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
254 aa  108  9.000000000000001e-23  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  31.58 
 
 
282 aa  108  1e-22  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_014148  Plim_2867  binding-protein-dependent transport systems inner membrane component  30.65 
 
 
277 aa  107  2e-22  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  30.17 
 
 
263 aa  107  2e-22  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_010725  Mpop_1095  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
264 aa  107  2e-22  Methylobacterium populi BJ001  Bacteria  normal  0.0240883  normal  0.166534 
 
 
-
 
NC_012791  Vapar_4760  binding-protein-dependent transport systems inner membrane component  26.82 
 
 
267 aa  106  4e-22  Variovorax paradoxus S110  Bacteria  normal  0.318809  n/a   
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  26.81 
 
 
249 aa  106  5e-22  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009484  Acry_0832  binding-protein-dependent transport systems inner membrane component  34.29 
 
 
254 aa  105  7e-22  Acidiphilium cryptum JF-5  Bacteria  normal  0.404323  n/a   
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  30.83 
 
 
277 aa  105  7e-22  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_012848  Rleg_4665  binding-protein-dependent transport systems inner membrane component  32.05 
 
 
284 aa  105  8e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.65192 
 
 
-
 
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