More than 300 homologs were found in PanDaTox collection
for query gene Shel_25820 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_25820  ABC-type metal ion transport system, permease component  100 
 
 
236 aa  469  1.0000000000000001e-131  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.961008  normal 
 
 
-
 
NC_009012  Cthe_1556  binding-protein-dependent transport systems inner membrane component  48.73 
 
 
236 aa  240  1e-62  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1486  binding-protein-dependent transport systems inner membrane component  37.38 
 
 
225 aa  154  1e-36  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.000000000000286975  n/a   
 
 
-
 
NC_009436  Ent638_1772  binding-protein-dependent transport systems inner membrane component  40.85 
 
 
222 aa  146  3e-34  Enterobacter sp. 638  Bacteria  normal  0.918282  hitchhiker  0.000827956 
 
 
-
 
NC_011883  Ddes_1541  binding-protein-dependent transport systems inner membrane component  41.45 
 
 
235 aa  146  3e-34  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.104084  n/a   
 
 
-
 
NC_013170  Ccur_08270  ABC-type metal ion transport system, permease component  37.22 
 
 
225 aa  142  6e-33  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154439  normal  0.55012 
 
 
-
 
NC_009715  CCV52592_1074  D-methionine transport system permease protein MetI  40.87 
 
 
224 aa  139  3e-32  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1770  binding-protein-dependent transport systems inner membrane component  38.89 
 
 
217 aa  139  3e-32  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.0000122974  n/a   
 
 
-
 
NC_007493  RSP_0130  ABC D-methionine uptake transporter, inner membrane subunit  40.28 
 
 
224 aa  139  3e-32  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.140263  n/a   
 
 
-
 
NC_013421  Pecwa_0858  binding-protein-dependent transport systems inner membrane component  43.09 
 
 
222 aa  139  3e-32  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1767  binding-protein-dependent transport systems inner membrane component  40.28 
 
 
224 aa  139  3e-32  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0577553  normal 
 
 
-
 
NC_009832  Spro_1396  binding-protein-dependent transport systems inner membrane component  37.86 
 
 
222 aa  139  4.999999999999999e-32  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008599  CFF8240_0968  D-methionine transport system permease protein MetI  42.21 
 
 
213 aa  139  6e-32  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_009431  Rsph17025_4332  hypothetical protein  40.28 
 
 
224 aa  137  1e-31  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.362545  normal  0.101939 
 
 
-
 
NC_011312  VSAL_I0887  D-methionine transport system permease protein MetI  37.62 
 
 
225 aa  137  1e-31  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0890  ABC transporter, permease protein  32.43 
 
 
226 aa  136  3.0000000000000003e-31  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009783  VIBHAR_01201  hypothetical protein  36.89 
 
 
225 aa  136  3.0000000000000003e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011365  Gdia_0869  binding-protein-dependent transport systems inner membrane component  35.32 
 
 
215 aa  135  4e-31  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.771315  normal 
 
 
-
 
NC_012856  Rpic12D_0862  binding-protein-dependent transport systems inner membrane component  37.68 
 
 
217 aa  135  7.000000000000001e-31  Ralstonia pickettii 12D  Bacteria  normal  0.0565276  normal  0.49182 
 
 
-
 
NC_010682  Rpic_0791  binding-protein-dependent transport systems inner membrane component  37.68 
 
 
217 aa  134  9.999999999999999e-31  Ralstonia pickettii 12J  Bacteria  normal  0.302745  normal  0.367632 
 
 
-
 
NC_013456  VEA_004239  methionine ABC transporter permease protein  37.14 
 
 
225 aa  134  9.999999999999999e-31  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0428  ABC transporter, permease protein  36.67 
 
 
225 aa  134  1.9999999999999998e-30  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2418  binding-protein dependent transport system inner membrane protein  37.62 
 
 
223 aa  133  1.9999999999999998e-30  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2018  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
224 aa  133  1.9999999999999998e-30  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.000000000000432369 
 
 
-
 
NC_003295  RSc0921  transmembrane ABC transporter protein  37.68 
 
 
217 aa  133  3e-30  Ralstonia solanacearum GMI1000  Bacteria  normal  0.773713  normal 
 
 
-
 
NC_009802  CCC13826_1249  putative ABC transporter, permease protein  38.94 
 
 
224 aa  131  6.999999999999999e-30  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0806  binding-protein-dependent transport systems inner membrane component  40.09 
 
 
246 aa  130  2.0000000000000002e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.602881 
 
 
-
 
NC_008687  Pden_4307  binding-protein-dependent transport systems inner membrane component  37.37 
 
 
224 aa  129  3e-29  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0252  binding-protein-dependent transport systems inner membrane component  39 
 
 
225 aa  129  3e-29  Marinobacter aquaeolei VT8  Bacteria  normal  0.302856  n/a   
 
 
-
 
NC_010717  PXO_03094  ABC transporter permease  40.87 
 
 
231 aa  129  4.0000000000000003e-29  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1611  binding-protein-dependent transport systems inner membrane component  37.1 
 
 
222 aa  128  8.000000000000001e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_0643  ABC transporter, permease protein  39.46 
 
 
221 aa  127  1.0000000000000001e-28  Campylobacter lari RM2100  Bacteria  normal  0.766537  n/a   
 
 
-
 
NC_010581  Bind_2456  binding-protein-dependent transport systems inner membrane component  40.28 
 
 
220 aa  126  2.0000000000000002e-28  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_1588  binding-protein-dependent transport systems inner membrane component  32.41 
 
 
235 aa  126  2.0000000000000002e-28  Gordonia bronchialis DSM 43247  Bacteria  normal  0.239912  n/a   
 
 
-
 
NC_010622  Bphy_0760  binding-protein-dependent transport systems inner membrane component  34.76 
 
 
217 aa  125  6e-28  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3885  binding-protein-dependent transport systems inner membrane component  35.89 
 
 
227 aa  125  8.000000000000001e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.199051 
 
 
-
 
NC_007347  Reut_A2552  binding-protein dependent transport system inner membrane protein  34.88 
 
 
217 aa  124  1e-27  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_0794  ABC transporter, permease protein  37.84 
 
 
303 aa  124  1e-27  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.485222  n/a   
 
 
-
 
NC_009727  CBUD_2000  methionine transport system permease protein  36.32 
 
 
218 aa  124  2e-27  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.445077  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0196  D-methionine ABC transporter, permease protein  36.32 
 
 
218 aa  124  2e-27  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0735  binding-protein-dependent transport systems inner membrane component  37.29 
 
 
217 aa  124  2e-27  Cupriavidus metallidurans CH34  Bacteria  normal  0.291848  normal 
 
 
-
 
NC_003912  CJE0864  ABC transporter, permease protein  37.39 
 
 
303 aa  123  3e-27  Campylobacter jejuni RM1221  Bacteria  normal  0.586541  n/a   
 
 
-
 
NC_010681  Bphyt_2987  binding-protein-dependent transport systems inner membrane component  34.76 
 
 
217 aa  122  4e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  0.626863  hitchhiker  0.00236834 
 
 
-
 
NC_009077  Mjls_3514  binding-protein-dependent transport systems inner membrane component  36.14 
 
 
227 aa  122  7e-27  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3394  binding-protein-dependent transport systems inner membrane component  37.74 
 
 
218 aa  121  8e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.393989  normal 
 
 
-
 
NC_009707  JJD26997_1239  ABC transporter, permease protein  36.94 
 
 
303 aa  121  9e-27  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3501  binding-protein-dependent transport systems inner membrane component  35.82 
 
 
227 aa  120  9.999999999999999e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2431  ABC metal ion transporter, inner membrane subunit  37.5 
 
 
237 aa  121  9.999999999999999e-27  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0101713  n/a   
 
 
-
 
NC_008705  Mkms_3574  binding-protein-dependent transport systems inner membrane component  35.82 
 
 
227 aa  120  9.999999999999999e-27  Mycobacterium sp. KMS  Bacteria  normal  normal  0.129763 
 
 
-
 
NC_013947  Snas_1773  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
213 aa  120  1.9999999999999998e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.560605 
 
 
-
 
NC_009720  Xaut_1144  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
228 aa  120  1.9999999999999998e-26  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2653  binding-protein-dependent transport systems inner membrane component  35.23 
 
 
224 aa  120  1.9999999999999998e-26  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1975  ABC transporter permease protein  36.12 
 
 
235 aa  120  1.9999999999999998e-26  Xylella fastidiosa M12  Bacteria  hitchhiker  0.00271099  n/a   
 
 
-
 
NC_010552  BamMC406_5215  binding-protein-dependent transport systems inner membrane component  36.79 
 
 
218 aa  119  3e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.206806 
 
 
-
 
NC_007925  RPC_0564  binding-protein-dependent transport systems inner membrane component  34.4 
 
 
221 aa  119  3e-26  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_4686  binding-protein-dependent transport systems inner membrane component  36.79 
 
 
218 aa  119  3e-26  Burkholderia ambifaria AMMD  Bacteria  normal  0.116542  normal 
 
 
-
 
NC_010577  XfasM23_1907  binding-protein-dependent transport systems inner membrane component  35.94 
 
 
235 aa  120  3e-26  Xylella fastidiosa M23  Bacteria  hitchhiker  0.0083693  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0449  methionine ABC transporter permease  38.71 
 
 
218 aa  119  3.9999999999999996e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  0.800882  n/a   
 
 
-
 
NC_006349  BMAA1438  ABC transporter, permease protein  38.71 
 
 
218 aa  119  3.9999999999999996e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  0.455899  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1868  ABC transporter, permease protein  38.71 
 
 
218 aa  119  3.9999999999999996e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  0.326462  n/a   
 
 
-
 
NC_007958  RPD_3224  binding-protein-dependent transport systems inner membrane component  35.59 
 
 
221 aa  119  3.9999999999999996e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009079  BMA10247_A0859  methionine ABC transporter permease  38.71 
 
 
218 aa  119  3.9999999999999996e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_2175  methionine ABC transporter permease  38.71 
 
 
218 aa  119  3.9999999999999996e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0547  methionine ABC transporter permease  38.71 
 
 
218 aa  119  3.9999999999999996e-26  Burkholderia pseudomallei 668  Bacteria  normal  0.460496  n/a   
 
 
-
 
NC_013512  Sdel_0359  binding-protein-dependent transport systems inner membrane component  38.42 
 
 
226 aa  119  4.9999999999999996e-26  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1771  binding-protein-dependent transport systems inner membrane component  34.1 
 
 
221 aa  119  4.9999999999999996e-26  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3790  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
230 aa  118  7.999999999999999e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.481635  n/a   
 
 
-
 
NC_010676  Bphyt_4540  binding-protein-dependent transport systems inner membrane component  37.79 
 
 
218 aa  118  9e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  0.141892  normal 
 
 
-
 
NC_010002  Daci_5612  binding-protein-dependent transport systems inner membrane component  37.8 
 
 
223 aa  117  9.999999999999999e-26  Delftia acidovorans SPH-1  Bacteria  normal  0.250327  normal  0.570083 
 
 
-
 
NC_009439  Pmen_2366  binding-protein-dependent transport systems inner membrane component  34.93 
 
 
217 aa  117  9.999999999999999e-26  Pseudomonas mendocina ymp  Bacteria  normal  0.0812331  hitchhiker  0.00268015 
 
 
-
 
NC_007974  Rmet_3857  DL-methionine transporter subunit  38.73 
 
 
217 aa  118  9.999999999999999e-26  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.955348 
 
 
-
 
NC_007492  Pfl01_0235  binding-protein dependent transport system inner membrane protein  35.29 
 
 
214 aa  117  1.9999999999999998e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.15851  normal 
 
 
-
 
NC_007952  Bxe_B0854  ABC methionine transporter, inner membrane subunit  37.33 
 
 
218 aa  117  1.9999999999999998e-25  Burkholderia xenovorans LB400  Bacteria  normal  0.0225125  hitchhiker  0.00619599 
 
 
-
 
NC_007951  Bxe_A0996  ABC methionine transporter, inner membrane subunit  37.79 
 
 
217 aa  116  3e-25  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2537  binding-protein-dependent transport systems inner membrane component  33.04 
 
 
221 aa  116  3e-25  Acidovorax citrulli AAC00-1  Bacteria  hitchhiker  0.00567563  normal  0.226034 
 
 
-
 
NC_009656  PSPA7_2911  ABC transporter permease  35.78 
 
 
217 aa  115  5e-25  Pseudomonas aeruginosa PA7  Bacteria  normal  0.144856  n/a   
 
 
-
 
NC_010551  BamMC406_0940  binding-protein-dependent transport systems inner membrane component  37.79 
 
 
217 aa  115  5e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  0.464419  normal 
 
 
-
 
NC_009439  Pmen_4504  binding-protein-dependent transport systems inner membrane component  38.5 
 
 
222 aa  115  5e-25  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0936  binding-protein-dependent transport systems inner membrane component  37.79 
 
 
217 aa  115  5e-25  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_34260  putative permease of ABC transporter  35.78 
 
 
217 aa  115  5e-25  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0163975 
 
 
-
 
NC_010511  M446_4490  binding-protein-dependent transport systems inner membrane component  35.32 
 
 
221 aa  115  5e-25  Methylobacterium sp. 4-46  Bacteria  normal  0.167219  normal  0.0252468 
 
 
-
 
NC_004311  BRA0962  ABC transporter, permease protein  36.41 
 
 
221 aa  115  6e-25  Brucella suis 1330  Bacteria  normal  0.496997  n/a   
 
 
-
 
NC_008709  Ping_3537  ABC transporter substrate binding inner membrane protein  35.64 
 
 
228 aa  115  6e-25  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0228117 
 
 
-
 
NC_009504  BOV_A0903  ABC transporter, permease protein  36.41 
 
 
221 aa  115  6e-25  Brucella ovis ATCC 25840  Bacteria  normal  0.840539  n/a   
 
 
-
 
NC_014165  Tbis_1907  binding-protein-dependent transporter inner membrane component  42.08 
 
 
218 aa  115  6.9999999999999995e-25  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.166968 
 
 
-
 
NC_013517  Sterm_3532  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
216 aa  115  6.9999999999999995e-25  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.530157  n/a   
 
 
-
 
NC_013169  Ksed_16990  ABC-type metal ion transport system, permease component  38.31 
 
 
217 aa  115  7.999999999999999e-25  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.126358  normal 
 
 
-
 
NC_010515  Bcenmc03_4932  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
218 aa  115  7.999999999999999e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0782482  normal  0.823992 
 
 
-
 
NC_008060  Bcen_0581  binding-protein-dependent transport systems inner membrane component  37.79 
 
 
217 aa  115  7.999999999999999e-25  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.713567  n/a   
 
 
-
 
NC_008061  Bcen_3030  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
218 aa  115  7.999999999999999e-25  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.233066  n/a   
 
 
-
 
NC_010508  Bcenmc03_1019  binding-protein-dependent transport systems inner membrane component  37.79 
 
 
217 aa  115  7.999999999999999e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_1060  binding-protein-dependent transport systems inner membrane component  37.79 
 
 
217 aa  115  7.999999999999999e-25  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5336  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
218 aa  115  7.999999999999999e-25  Burkholderia cenocepacia HI2424  Bacteria  normal  0.808195  normal 
 
 
-
 
NC_009667  Oant_1394  binding-protein-dependent transport systems inner membrane component  36.41 
 
 
221 aa  114  8.999999999999998e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0282  binding-protein dependent transport system inner membrane protein  39.71 
 
 
224 aa  114  8.999999999999998e-25  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0312  ABC metal ion transporter, inner membrane subunit  37.5 
 
 
218 aa  114  8.999999999999998e-25  Burkholderia sp. 383  Bacteria  normal  0.555716  normal 
 
 
-
 
NC_004578  PSPTO_5261  D-methionine ABC transporter, permease protein  39.8 
 
 
224 aa  114  1.0000000000000001e-24  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4173  ABC metal ion transporter, inner membrane subunit  37.21 
 
 
217 aa  114  1.0000000000000001e-24  Burkholderia sp. 383  Bacteria  normal  0.325664  normal  0.434406 
 
 
-
 
NC_011992  Dtpsy_1513  binding-protein-dependent transport systems inner membrane component  33.77 
 
 
221 aa  114  1.0000000000000001e-24  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2344  binding-protein-dependent transport systems inner membrane component  33.77 
 
 
221 aa  114  1.0000000000000001e-24  Acidovorax sp. JS42  Bacteria  normal  0.251109  normal 
 
 
-
 
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